RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 hCG_2014768A0A024R1R8 64 aa12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 PIK3CDO00329 1044 aa12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 ASMTLO95671 621 aa12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 P4HBP07237 508 aaKnown RBP12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 CCNB1P14635 433 aa12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 IL1R1P14778 569 aa12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 GM2AP17900 193 aa12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 SLC1A1P43005 524 aa12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 CENPCQ03188 943 aa12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 EFTUD2Q15029 972 aaKnown RBP eCLIP12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 AOC3Q16853 763 aa12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 CLEC16AQ2KHT3 1053 aa12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 SMTNL2Q2TAL5 461 aa12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 ISLR2Q6UXK2 745 aa12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 LRRC74BQ6ZQY2 392 aa12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 PDIK1LQ8N165 341 aa12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 GLIS1Q8NBF1 620 aa12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 TRIM11Q96F44 468 aa12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 PRKAG3Q9UGI9 489 aa12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 NOCTQ9UK39 431 aaKnown RBP12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 CCPG1Q9ULG6 757 aa12.22□□□□□ -0.45
PPFIA2-227ENST00000552948 CLRN2A0PK11 232 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 PPEF1O14829 653 aaPredicted RBP12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 SP100P23497 879 aaPredicted RBP12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 ARL4CP56559 192 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 DNAJC24Q6P3W2 148 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 RIBC1Q8N443 379 aaPredicted RBP12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 CERS5Q8N5B7 392 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 JDP2Q8WYK2 163 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 CFAP36Q96G28 342 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 CEP170P1Q96L14 293 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 COA1Q9GZY4 146 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 FBXO28Q9NVF7 368 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 DMAC2Q9NW81 257 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 LRCH1Q9Y2L9 728 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 ADGRA3Q8IWK6 1321 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 AHCYL1O43865 530 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 MYL2P10916 166 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 GNA15P30679 374 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 QARSP47897 775 aaKnown RBP12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 BPIFB4P59827 614 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 SIX1Q15475 284 aaPredicted RBP12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 LRRC23Q53EV4 343 aaPredicted RBP12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 CDCA2Q69YH5 1023 aaPredicted RBP12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 CLNKQ7Z7G1 428 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 ASAP3Q8TDY4 903 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 SHC3Q92529 594 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 TMEM120AQ9BXJ8 343 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 CALN1Q9BXU9 219 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 G3BP2Q9UN86 482 aaKnown RBP12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 ZHX2Q9Y6X8 837 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 GAKO14976 1311 aa12.21□□□□□ -0.45
PPFIA2-227ENST00000552948 PSMD10O75832 226 aa12.21□□□□□ -0.46
PPFIA2-227ENST00000552948 BGNP21810 368 aa12.21□□□□□ -0.46
PPFIA2-227ENST00000552948 SERPINB6P35237 376 aa12.21□□□□□ -0.46
PPFIA2-227ENST00000552948 ACOT2P49753 483 aa12.21□□□□□ -0.46
PPFIA2-227ENST00000552948 ALDH18A1P54886 795 aaKnown RBP12.21□□□□□ -0.46
PPFIA2-227ENST00000552948 CUL3Q13618 768 aa12.21□□□□□ -0.46
PPFIA2-227ENST00000552948 CCNJLQ8IV13 435 aa12.21□□□□□ -0.46
PPFIA2-227ENST00000552948 PPM1NQ8N819 430 aa12.21□□□□□ -0.46
PPFIA2-227ENST00000552948 CCDC110Q8TBZ0 833 aa12.21□□□□□ -0.46
PPFIA2-227ENST00000552948 CHURC1Q8WUH1 139 aa12.21□□□□□ -0.46
PPFIA2-227ENST00000552948 BTBD10Q9BSF8 475 aa12.21□□□□□ -0.46
PPFIA2-227ENST00000552948 MAK16Q9BXY0 300 aaKnown RBP12.21□□□□□ -0.46
PPFIA2-227ENST00000552948 SHCBP1LQ9BZQ2 653 aa12.21□□□□□ -0.46
PPFIA2-227ENST00000552948 PCSK1NQ9UHG2 260 aa12.21□□□□□ -0.46
PPFIA2-227ENST00000552948 ANGPTL2Q9UKU9 493 aa12.21□□□□□ -0.46
PPFIA2-227ENST00000552948 COL4A1P02462 1669 aa12.21□□□□□ -0.46
PPFIA2-227ENST00000552948 P4HA2O15460 535 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 PROSCO94903 275 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 YWHABP31946 246 aaKnown RBP12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 GEMIN4P57678 1058 aaKnown RBP12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 MFSD7Q6UXD7 560 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 ATP11CQ8NB49 1132 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 PAFAH2Q99487 392 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 TMEM8AQ9HCN3 771 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 SLC17A7Q9P2U7 560 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 DOCK2Q92608 1830 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 IGKV6D-41A0A0C4DH26 115 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 WFS1O76024 890 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 SLC34A1Q06495 639 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 ACVR2BQ13705 512 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 MAPK6Q16659 721 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 PPP1R15BQ5SWA1 713 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 C4orf50Q6ZRC1 276 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 AMIGO3Q86WK7 504 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 ZCCHC9Q8N567 271 aaKnown RBP12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 LMO3Q8TAP4 145 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 PLEKHO2Q8TD55 490 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 ACER1Q8TDN7 264 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 PSPC1Q8WXF1 523 aaKnown RBP12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 SYT11Q9BT88 431 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 CYP4F11Q9HBI6 524 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 NDE1Q9NXR1 346 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 COPEO14579 308 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 DNALI1O14645 258 aaPredicted RBP12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 HSPA1LP34931 641 aa12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 HADHBP55084 474 aaKnown RBP12.2□□□□□ -0.46
PPFIA2-227ENST00000552948 LAMB3Q13751 1172 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms