RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 KYAT1Q16773 422 aa12.33□□□□□ -0.44
TMEM116-218ENST00000552839 BMT2Q1RMZ1 405 aa12.33□□□□□ -0.44
TMEM116-218ENST00000552839 ZSCAN23Q3MJ62 389 aa12.33□□□□□ -0.44
TMEM116-218ENST00000552839 EPM2AIP1Q7L775 607 aaPredicted RBP12.33□□□□□ -0.44
TMEM116-218ENST00000552839 GRASPQ7Z6J2 395 aaPredicted RBP12.33□□□□□ -0.44
TMEM116-218ENST00000552839 DHTKD1Q96HY7 919 aaPredicted RBP12.33□□□□□ -0.44
TMEM116-218ENST00000552839 COLEC11Q9BWP8 271 aa12.33□□□□□ -0.44
TMEM116-218ENST00000552839 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.33□□□□□ -0.44
TMEM116-218ENST00000552839 TOPORSQ9NS56 1045 aaPredicted RBP12.33□□□□□ -0.44
TMEM116-218ENST00000552839 SPATA6Q9NWH7 488 aaPredicted RBP12.33□□□□□ -0.44
TMEM116-218ENST00000552839 FBXO4Q9UKT5 387 aa12.33□□□□□ -0.44
TMEM116-218ENST00000552839 AGO2Q9UKV8 859 aaKnown RBP12.33□□□□□ -0.44
TMEM116-218ENST00000552839 FRMD4BQ9Y2L6 1034 aa12.33□□□□□ -0.44
TMEM116-218ENST00000552839 ZFP37Q9Y6Q3 630 aaPredicted RBP12.33□□□□□ -0.44
TMEM116-218ENST00000552839 GPR179Q6PRD1 2367 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 A0A1B0GUA9 196 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 PDXKO00764 312 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 SPTLC1O15269 473 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 OGTO15294 1046 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 PIGRP01833 764 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 CD72P21854 359 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 GARTP22102 1010 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 NR2F2P24468 414 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 STX17P56962 302 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 TPM4P67936 248 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 NTHL1P78549 312 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 CSTF1Q05048 431 aaKnown RBP12.32□□□□□ -0.44
TMEM116-218ENST00000552839 LRRC63Q05C16 580 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 KCNA1Q09470 495 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 UBXN2BQ14CS0 331 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 MLF2Q15773 248 aaPredicted RBP12.32□□□□□ -0.44
TMEM116-218ENST00000552839 USP41Q3LFD5 358 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 SLC44A4Q53GD3 710 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 EEF1DP3Q658K8 133 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 CEP135Q66GS9 1140 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 PRSS55Q6UWB4 352 aaPredicted RBP12.32□□□□□ -0.44
TMEM116-218ENST00000552839 GPR65Q8IYL9 337 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 GSTCDQ8NEC7 633 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 RABGGTAQ92696 567 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 FAM212AQ96EL1 285 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 BORCS6Q96GS4 357 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 BCO2Q9BYV7 579 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 CDT1Q9H211 546 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 PCIF1Q9H4Z3 704 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 AGPAT3Q9NRZ7 376 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 ADAM28Q9UKQ2 775 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 CDH7Q9ULB5 785 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 PCDHGA2Q9Y5H1 932 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 VWA8A3KMH1 1905 aa12.32□□□□□ -0.44
TMEM116-218ENST00000552839 ZMYM2Q9UBW7 1377 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 NCOR2Q9Y618 2525 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 FAM170BA6NMN3 283 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 CETN3O15182 167 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 NR3C1P04150 777 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 EDN1P05305 212 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 EPB41P11171 864 aaKnown RBP12.31□□□□□ -0.44
TMEM116-218ENST00000552839 SDHBP21912 280 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 CCNE1P24864 410 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 PRKCQQ04759 706 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 PPP2R3AQ06190 1150 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 MCL1Q07820 350 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 DPCR1Q3MIW9 517 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 CCDC40Q4G0X9 1142 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 COBLL1Q53SF7 1204 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 RBM43Q6ZSC3 357 aaKnown RBP12.31□□□□□ -0.44
TMEM116-218ENST00000552839 USP37Q86T82 979 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 CREBRFQ8IUR6 639 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 GPD1LQ8N335 351 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 GPR161Q8N6U8 529 aaKnown RBP12.31□□□□□ -0.44
TMEM116-218ENST00000552839 XXYLT1Q8NBI6 393 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 ZBTB44Q8NCP5 570 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 ATRIPQ8WXE1 791 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 FGF13Q92913 245 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 KCNN1Q92952 543 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 SAAL1Q96ER3 474 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 ZBTB45Q96K62 511 aaPredicted RBP12.31□□□□□ -0.44
TMEM116-218ENST00000552839 ACAP3Q96P50 834 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 CBWD1Q9BRT8 395 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 FAM213AQ9BRX8 229 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 STRA6Q9BX79 667 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 OSBPL6Q9BZF3 934 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 NXF3Q9H4D5 531 aaKnown RBP12.31□□□□□ -0.44
TMEM116-218ENST00000552839 RPF1Q9H9Y2 349 aaKnown RBP12.31□□□□□ -0.44
TMEM116-218ENST00000552839 KIAA1586Q9HCI6 787 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 LTB4R2Q9NPC1 389 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 HSPBP1Q9NZL4 362 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 MAGEC2Q9UBF1 373 aaPredicted RBP12.31□□□□□ -0.44
TMEM116-218ENST00000552839 CACNG4Q9UBN1 327 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 FBXW11Q9UKB1 542 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 GIT1Q9Y2X7 761 aa12.31□□□□□ -0.44
TMEM116-218ENST00000552839 R3HCC1Q9Y3T6 440 aaKnown RBP12.31□□□□□ -0.44
TMEM116-218ENST00000552839 TPRP12270 2363 aaKnown RBP12.3□□□□□ -0.44
TMEM116-218ENST00000552839 GOLGA8IPA6NC78 632 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 GOLGA8JA6NMD2 632 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 TTLL13PA6NNM8 815 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 BECN2A8MW95 431 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 TISP43B9A030 160 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 ANKRD63C9JTQ0 380 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 EXTL3O43909 919 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 LILRB5O75023 590 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms