RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 PALM3A6NDB9 673 aaPredicted RBP9.3□□□□□ -0.92
PRIM1-208ENST00000552590 PIK3CDO00329 1044 aa9.3□□□□□ -0.92
PRIM1-208ENST00000552590 C6P13671 934 aa9.3□□□□□ -0.92
PRIM1-208ENST00000552590 SFPQP23246 707 aaKnown RBP eCLIP9.3□□□□□ -0.92
PRIM1-208ENST00000552590 SCNN1GP51170 649 aa9.3□□□□□ -0.92
PRIM1-208ENST00000552590 RIPPLY3P57055 190 aa9.3□□□□□ -0.92
PRIM1-208ENST00000552590 DRP2Q13474 957 aa9.3□□□□□ -0.92
PRIM1-208ENST00000552590 C4orf17Q53FE4 359 aa9.3□□□□□ -0.92
PRIM1-208ENST00000552590 USP39Q53GS9 565 aaKnown RBP9.3□□□□□ -0.92
PRIM1-208ENST00000552590 PRICKLE2Q7Z3G6 844 aa9.3□□□□□ -0.92
PRIM1-208ENST00000552590 SYT12Q8IV01 421 aa9.3□□□□□ -0.92
PRIM1-208ENST00000552590 KCTD15Q96SI1 283 aaPredicted RBP9.3□□□□□ -0.92
PRIM1-208ENST00000552590 TMEM209Q96SK2 561 aa9.3□□□□□ -0.92
PRIM1-208ENST00000552590 GAD1Q99259 594 aa9.3□□□□□ -0.92
PRIM1-208ENST00000552590 FDXACB1Q9BRP7 624 aaPredicted RBP9.3□□□□□ -0.92
PRIM1-208ENST00000552590 TTPALQ9BTX7 342 aa9.3□□□□□ -0.92
PRIM1-208ENST00000552590 OXCT2Q9BYC2 517 aaPredicted RBP9.3□□□□□ -0.92
PRIM1-208ENST00000552590 CACNG4Q9UBN1 327 aa9.3□□□□□ -0.92
PRIM1-208ENST00000552590 EBF1Q9UH73 591 aa9.3□□□□□ -0.92
PRIM1-208ENST00000552590 FBN3Q75N90 2809 aa9.3□□□□□ -0.92
PRIM1-208ENST00000552590 TNRC6BQ9UPQ9 1833 aaKnown RBP9.3□□□□□ -0.92
PRIM1-208ENST00000552590 BSNQ9UPA5 3926 aa9.3□□□□□ -0.92
PRIM1-208ENST00000552590 ARL5CA6NH57 179 aa9.29□□□□□ -0.92
PRIM1-208ENST00000552590 TLX3O43711 291 aaPredicted RBP9.29□□□□□ -0.92
PRIM1-208ENST00000552590 TADA2AO75478 443 aa9.29□□□□□ -0.92
PRIM1-208ENST00000552590 GJA1P17302 382 aa9.29□□□□□ -0.92
PRIM1-208ENST00000552590 KIF5BP33176 963 aa9.29□□□□□ -0.92
PRIM1-208ENST00000552590 OR1D2P34982 312 aa9.29□□□□□ -0.92
PRIM1-208ENST00000552590 PTGER3P43115 390 aa9.29□□□□□ -0.92
PRIM1-208ENST00000552590 TNK2Q07912 1038 aa9.29□□□□□ -0.92
PRIM1-208ENST00000552590 CCDC178Q5BJE1 867 aa9.29□□□□□ -0.92
PRIM1-208ENST00000552590 FSTL4Q6MZW2 842 aa9.29□□□□□ -0.92
PRIM1-208ENST00000552590 CATSPER4Q7RTX7 472 aa9.29□□□□□ -0.92
PRIM1-208ENST00000552590 C11orf74Q86VG3 221 aa9.29□□□□□ -0.92
PRIM1-208ENST00000552590 DAGLBQ8NCG7 672 aa9.29□□□□□ -0.92
PRIM1-208ENST00000552590 SUV39H2Q9H5I1 410 aa9.29□□□□□ -0.92
PRIM1-208ENST00000552590 TRPV4Q9HBA0 871 aa9.29□□□□□ -0.92
PRIM1-208ENST00000552590 CEP131Q9UPN4 1083 aa9.29□□□□□ -0.92
PRIM1-208ENST00000552590 CSMD1Q96PZ7 3565 aa9.29□□□□□ -0.92
PRIM1-208ENST00000552590 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 ZNF197O14709 1029 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 HMMRO75330 724 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 MOSPD3O75425 235 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 MAFO75444 373 aaPredicted RBP9.28□□□□□ -0.92
PRIM1-208ENST00000552590 PCP11498 1178 aaKnown RBP9.28□□□□□ -0.92
PRIM1-208ENST00000552590 MLH1P40692 756 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 IL12RB1P42701 662 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 CXADRP78310 365 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 GFPT1Q06210 699 aaPredicted RBP9.28□□□□□ -0.92
PRIM1-208ENST00000552590 FCHO2Q0JRZ9 810 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 RAB33AQ14088 237 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 DOC2BQ14184 412 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 UBXN11Q5T124 520 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 FAM171A1Q5VUB5 890 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 MIS18BP1Q6P0N0 1132 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 RIPOR1Q6ZS17 1223 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 PDZD4Q76G19 769 aaPredicted RBP9.28□□□□□ -0.92
PRIM1-208ENST00000552590 NAXDQ8IW45 347 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 HASPINQ8TF76 798 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 LRRC3BQ96PB8 259 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 MXRA8Q9BRK3 442 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 LY9Q9HBG7 655 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 AGO4Q9HCK5 861 aaKnown RBP9.28□□□□□ -0.92
PRIM1-208ENST00000552590 MAFBQ9Y5Q3 323 aaPredicted RBP9.28□□□□□ -0.92
PRIM1-208ENST00000552590 SALL3Q9BXA9 1300 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 ICE1Q9Y2F5 2266 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 PCDH15Q96QU1 1955 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 TNFRSF10BO14763 440 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 RRP8O43159 456 aaKnown RBP9.28□□□□□ -0.92
PRIM1-208ENST00000552590 MICAL2O94851 1124 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 EGFP01133 1207 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 LRG1P02750 347 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 RHOQP17081 205 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 MAP2K3P46734 347 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 GRSF1Q12849 480 aaKnown RBP eCLIP9.28□□□□□ -0.92
PRIM1-208ENST00000552590 DMC1Q14565 340 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 UBE2SQ16763 222 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 TMEM196Q5HYL7 178 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 RPLP0P6Q8NHW5 317 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 RNF41Q9H4P4 317 aaPredicted RBP9.28□□□□□ -0.92
PRIM1-208ENST00000552590 ZFP64Q9NPA5 681 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 KIAA1522Q9P206 1035 aaPredicted RBP9.28□□□□□ -0.92
PRIM1-208ENST00000552590 SLC6A14Q9UN76 642 aa9.28□□□□□ -0.92
PRIM1-208ENST00000552590 SF3B1O75533 1304 aaKnown RBP eCLIP9.27□□□□□ -0.924e-7■■■■■ 66.5
PRIM1-208ENST00000552590 HELZP42694 1942 aaKnown RBP9.27□□□□□ -0.93
PRIM1-208ENST00000552590 ITGA4P13612 1032 aa9.27□□□□□ -0.93
PRIM1-208ENST00000552590 ITPKAP23677 461 aa9.27□□□□□ -0.93
PRIM1-208ENST00000552590 ADSSP30520 456 aa9.27□□□□□ -0.93
PRIM1-208ENST00000552590 CHRNA4P43681 627 aa9.27□□□□□ -0.93
PRIM1-208ENST00000552590 CYP4A22Q5TCH4 519 aa9.27□□□□□ -0.93
PRIM1-208ENST00000552590 RTL10Q7L3V2 364 aa9.27□□□□□ -0.93
PRIM1-208ENST00000552590 LPCAT2Q7L5N7 544 aa9.27□□□□□ -0.93
PRIM1-208ENST00000552590 SYT13Q7L8C5 426 aa9.27□□□□□ -0.93
PRIM1-208ENST00000552590 SMG8Q8ND04 991 aaKnown RBP9.27□□□□□ -0.93
PRIM1-208ENST00000552590 WBP1Q96G27 269 aa9.27□□□□□ -0.93
PRIM1-208ENST00000552590 GPATCH3Q96I76 525 aa9.27□□□□□ -0.93
PRIM1-208ENST00000552590 PAAF1Q9BRP4 392 aa9.27□□□□□ -0.93
PRIM1-208ENST00000552590 ARHGAP9Q9BRR9 750 aa9.27□□□□□ -0.93
PRIM1-208ENST00000552590 FZD8Q9H461 694 aa9.27□□□□□ -0.93
PRIM1-208ENST00000552590 SLITRK6Q9H5Y7 841 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms