RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 CLDN3O15551 220 aa16.8■□□□□ 0.28
BRF1-220ENST00000552127 TRAK2O60296 914 aa16.8■□□□□ 0.28
BRF1-220ENST00000552127 ECI2O75521 394 aa16.8■□□□□ 0.28
BRF1-220ENST00000552127 HNRNPA1P09651 372 aaKnown RBP eCLIP16.8■□□□□ 0.28
BRF1-220ENST00000552127 KCNE1P15382 129 aa16.8■□□□□ 0.28
BRF1-220ENST00000552127 SPINK2P20155 84 aa16.8■□□□□ 0.28
BRF1-220ENST00000552127 DDIT3P35638 169 aa16.8■□□□□ 0.28
BRF1-220ENST00000552127 MATR3P43243 847 aaKnown RBP eCLIP16.8■□□□□ 0.28
BRF1-220ENST00000552127 NASPP49321 788 aaPredicted RBP16.8■□□□□ 0.28
BRF1-220ENST00000552127 SOX4Q06945 474 aaPredicted RBP16.8■□□□□ 0.28
BRF1-220ENST00000552127 MCL1Q07820 350 aa16.8■□□□□ 0.28
BRF1-220ENST00000552127 PSMD5Q16401 504 aa16.8■□□□□ 0.28
BRF1-220ENST00000552127 UPP1Q16831 310 aa16.8■□□□□ 0.28
BRF1-220ENST00000552127 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.8■□□□□ 0.28
BRF1-220ENST00000552127 KRI1Q8N9T8 703 aaKnown RBP16.8■□□□□ 0.28
BRF1-220ENST00000552127 PIK3R5Q8WYR1 880 aa16.8■□□□□ 0.28
BRF1-220ENST00000552127 ZMAT2Q96NC0 199 aaKnown RBP16.8■□□□□ 0.28
BRF1-220ENST00000552127 ARRDC1-AS1Q9H2J1 176 aa16.8■□□□□ 0.28
BRF1-220ENST00000552127 ZHX3Q9H4I2 956 aa16.8■□□□□ 0.28
BRF1-220ENST00000552127 FBXW11Q9UKB1 542 aa16.8■□□□□ 0.28
BRF1-220ENST00000552127 TBX20Q9UMR3 447 aa16.8■□□□□ 0.28
BRF1-220ENST00000552127 LAMA5O15230 3695 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 AXIN1O15169 862 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 CCL16O15467 120 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 MEFVO15553 781 aaPredicted RBP16.79■□□□□ 0.28
BRF1-220ENST00000552127 B3GAT3O94766 335 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 PIGRP01833 764 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 HSP90AA1P07900 732 aaKnown RBP16.79■□□□□ 0.28
BRF1-220ENST00000552127 ZNF806P0C7X5 589 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 LIG4P49917 911 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 FOXC1Q12948 553 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 STK38Q15208 465 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 SEZ6Q53EL9 994 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 PPM1LQ5SGD2 360 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 RRAGBQ5VZM2 374 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 PDXDC1Q6P996 788 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 LONP2Q86WA8 852 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 CEP57Q86XR8 500 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 C3orf58Q8NDZ4 430 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 ING5Q8WYH8 240 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 DNASE1L2Q92874 299 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 FIZ1Q96SL8 496 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 ADAM33Q9BZ11 813 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 HAPLN2Q9GZV7 340 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 WASF3Q9UPY6 502 aa16.79■□□□□ 0.28
BRF1-220ENST00000552127 ASH1LQ9NR48 2969 aaKnown RBP16.78■□□□□ 0.28
BRF1-220ENST00000552127 TAF4O00268 1085 aa16.78■□□□□ 0.28
BRF1-220ENST00000552127 ZIC2O95409 532 aaPredicted RBP16.78■□□□□ 0.28
BRF1-220ENST00000552127 C8AP07357 584 aa16.78■□□□□ 0.28
BRF1-220ENST00000552127 FGFR3P22607 806 aa16.78■□□□□ 0.28
BRF1-220ENST00000552127 ABCD1P33897 745 aa16.78■□□□□ 0.28
BRF1-220ENST00000552127 GAS6Q14393 721 aa16.78■□□□□ 0.28
BRF1-220ENST00000552127 LIN9Q5TKA1 542 aa16.78■□□□□ 0.28
BRF1-220ENST00000552127 HEATR6Q6AI08 1181 aaKnown RBP16.78■□□□□ 0.28
BRF1-220ENST00000552127 CD300LGQ6UXG3 332 aa16.78■□□□□ 0.28
BRF1-220ENST00000552127 CCDC73Q6ZRK6 1079 aa16.78■□□□□ 0.28
BRF1-220ENST00000552127 CEP68Q76N32 757 aa16.78■□□□□ 0.28
BRF1-220ENST00000552127 LNX1Q8TBB1 728 aaPredicted RBP16.78■□□□□ 0.28
BRF1-220ENST00000552127 DDX27Q96GQ7 796 aaKnown RBP16.78■□□□□ 0.28
BRF1-220ENST00000552127 ZNF396Q96N95 335 aaPredicted RBP16.78■□□□□ 0.28
BRF1-220ENST00000552127 HCFC1R1Q9NWW0 138 aa16.78■□□□□ 0.28
BRF1-220ENST00000552127 COL4A2P08572 1712 aa16.78■□□□□ 0.28
BRF1-220ENST00000552127 TICRRQ7Z2Z1 1910 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 PODXLO00592 558 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 TRAPPC3O43617 180 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 XYLBO75191 536 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 CLTAP09496 248 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 CXCL8P10145 99 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 IGFBP6P24592 240 aaPredicted RBP16.77■□□□□ 0.28
BRF1-220ENST00000552127 NMT1P30419 496 aaKnown RBP16.77■□□□□ 0.28
BRF1-220ENST00000552127 HOXA9P31269 272 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 STAT6P42226 847 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 GTF2BQ00403 316 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 SLC10A6Q3KNW5 377 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 TANGO2Q6ICL3 276 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 DYMQ7RTS9 669 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 MAP4K3Q8IVH8 894 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 LINC00301Q8NCQ3 95 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 FAM3CQ92520 227 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 GATA6Q92908 595 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 C18orf25Q96B23 403 aaPredicted RBP16.77■□□□□ 0.28
BRF1-220ENST00000552127 MCRS1Q96EZ8 462 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 CLSTN3Q9BQT9 956 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 ST6GALNAC4Q9H4F1 302 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 KCNH3Q9ULD8 1083 aa16.77■□□□□ 0.28
BRF1-220ENST00000552127 SPAG17Q6Q759 2223 aa16.76■□□□□ 0.27
BRF1-220ENST00000552127 A0A087X0B3 334 aa16.76■□□□□ 0.27
BRF1-220ENST00000552127 I3L4J1 428 aa16.76■□□□□ 0.27
BRF1-220ENST00000552127 K7ESF4 209 aa16.76■□□□□ 0.27
BRF1-220ENST00000552127 GIPC1O14908 333 aa16.76■□□□□ 0.27
BRF1-220ENST00000552127 SPTLC2O15270 562 aa16.76■□□□□ 0.27
BRF1-220ENST00000552127 FAM189A1O60320 539 aa16.76■□□□□ 0.27
BRF1-220ENST00000552127 TOP3BO95985 862 aaKnown RBP16.76■□□□□ 0.27
BRF1-220ENST00000552127 CHRNB1P11230 501 aa16.76■□□□□ 0.27
BRF1-220ENST00000552127 PDIA4P13667 645 aaKnown RBP16.76■□□□□ 0.27
BRF1-220ENST00000552127 TKTP29401 623 aaKnown RBP16.76■□□□□ 0.27
BRF1-220ENST00000552127 RPL9P32969 192 aaKnown RBP16.76■□□□□ 0.27
BRF1-220ENST00000552127 BRCC3P46736 316 aa16.76■□□□□ 0.27
BRF1-220ENST00000552127 NOVA1P51513 510 aaKnown RBP16.76■□□□□ 0.27
BRF1-220ENST00000552127 KYAT1Q16773 422 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms