RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	CALR3	Q96L12	384 aa	Known RBP	6.63	□□□□□ -1.35
RACGAP1-223	ENST00000551260	LRRC3B	Q96PB8	259 aa		6.63	□□□□□ -1.35
RACGAP1-223	ENST00000551260	COLEC11	Q9BWP8	271 aa		6.63	□□□□□ -1.35
RACGAP1-223	ENST00000551260	APOL6	Q9BWW8	343 aa		6.63	□□□□□ -1.35
RACGAP1-223	ENST00000551260	NUSAP1	Q9BXS6	441 aa	Known RBP	6.63	□□□□□ -1.35
RACGAP1-223	ENST00000551260	GCOM2	Q9BZD3	368 aa	Predicted RBP	6.63	□□□□□ -1.35
RACGAP1-223	ENST00000551260	TPSD1	Q9BZJ3	242 aa		6.63	□□□□□ -1.35
RACGAP1-223	ENST00000551260	C8orf33	Q9H7E9	229 aa	Predicted RBP	6.63	□□□□□ -1.35
RACGAP1-223	ENST00000551260	LY9	Q9HBG7	655 aa		6.63	□□□□□ -1.35
RACGAP1-223	ENST00000551260	TFIP11	Q9UBB9	837 aa	Known RBP	6.63	□□□□□ -1.35
RACGAP1-223	ENST00000551260	DKK4	Q9UBT3	224 aa		6.63	□□□□□ -1.35
RACGAP1-223	ENST00000551260	SERTAD1	Q9UHV2	236 aa		6.63	□□□□□ -1.35
RACGAP1-223	ENST00000551260	ADAM28	Q9UKQ2	775 aa		6.63	□□□□□ -1.35
RACGAP1-223	ENST00000551260	HES2	Q9Y543	173 aa		6.63	□□□□□ -1.35
RACGAP1-223	ENST00000551260	MAFB	Q9Y5Q3	323 aa	Predicted RBP	6.63	□□□□□ -1.35
RACGAP1-223	ENST00000551260	USP3	Q9Y6I4	520 aa		6.63	□□□□□ -1.35
RACGAP1-223	ENST00000551260	NBPF19	A0A087WUL8	3843 aa		6.63	□□□□□ -1.35
RACGAP1-223	ENST00000551260	ITPR2	Q14571	2701 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	CNTNAP2	Q9UHC6	1331 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	FAM149A	A5PLN7	773 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	MAFG	O15525	162 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	ANP32C	O43423	234 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	EGF	P01133	1207 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	CFI	P05156	583 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	THBS1	P07996	1170 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	POU2F2	P09086	479 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	SFPQ	P23246	707 aa	Known RBP eCLIP	6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	OR1D2	P34982	312 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	DGKE	P52429	567 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	MLLT6	P55198	1093 aa	Predicted RBP	6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	CREM	Q03060	361 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	TNK2	Q07912	1038 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	TRAF1	Q13077	416 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	KARS	Q15046	597 aa	Known RBP	6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	SEC23A	Q15436	765 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	IFIT1B	Q5T764	474 aa	Known RBP	6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	FAM171A1	Q5VUB5	890 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	RIPOR1	Q6ZS17	1223 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	TOGARAM2	Q6ZUX3	1019 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	RALGPS2	Q86X27	583 aa	Predicted RBP	6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	SYNPO	Q8N3V7	929 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	HDDC3	Q8N4P3	179 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	DAGLB	Q8NCG7	672 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	GPATCH3	Q96I76	525 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	SH2D3A	Q9BRG2	576 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	TRIM4	Q9C037	500 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	ZNF358	Q9NW07	568 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	EVL	Q9UI08	416 aa	Predicted RBP	6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	PCDHA6	Q9UN73	950 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	PCDHA8	Q9Y5H6	950 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	CABIN1	Q9Y6J0	2220 aa		6.62	□□□□□ -1.35
RACGAP1-223	ENST00000551260	NOTCH2	Q04721	2471 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	BOD1L1	Q8NFC6	3051 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	ZMYM6	O95789	1325 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260		A0A1B0GTH6	734 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	TMEM150B	A6NC51	233 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260		A6NJY4	79 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260		B8ZZF3	427 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	CHAD	O15335	359 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	DHX15	O43143	795 aa	Known RBP	6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	TLX3	O43711	291 aa	Predicted RBP	6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	SLC28A2	O43868	658 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	OPHN1	O60890	802 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	F11	P03951	625 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	PC	P11498	1178 aa	Known RBP	6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	ITGA4	P13612	1032 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	IGFBP6	P24592	240 aa	Predicted RBP	6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	U2AF2	P26368	475 aa	Known RBP eCLIP	6.61	□□□□□ -1.35	9e-7	■■□□□ 11.7
RACGAP1-223	ENST00000551260	PTGER3	P43115	390 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	EPHA4	P54764	986 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	LY6D	Q14210	128 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	TEAD2	Q15562	447 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	CCDC178	Q5BJE1	867 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	NAIF1	Q69YI7	327 aa	Predicted RBP	6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	MIS18BP1	Q6P0N0	1132 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	CYB5R4	Q7L1T6	521 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	YAF2	Q8IY57	180 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	GPR65	Q8IYL9	337 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	MINDY1	Q8N5J2	469 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	CAMKK1	Q8N5S9	505 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	FRMD1	Q8N878	549 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	ZSCAN1	Q8NBB4	408 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	CHFR	Q96EP1	664 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	MSANTD3	Q96H12	275 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	TTPAL	Q9BTX7	342 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	EIF2A	Q9BY44	585 aa	Known RBP	6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	FZD8	Q9H461	694 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	RNF41	Q9H4P4	317 aa	Predicted RBP	6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	AVEN	Q9NQS1	362 aa	Predicted RBP	6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	AGPAT5	Q9NUQ2	364 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	GABBR1	Q9UBS5	961 aa		6.61	□□□□□ -1.35
RACGAP1-223	ENST00000551260	CIT	O14578	2027 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	MYH10	P35580	1976 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	ANAPC1	Q9H1A4	1944 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	KNL1	Q8NG31	2342 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	hCG_1642624	A0A1W2PR95	340 aa		6.6	□□□□□ -1.35
RACGAP1-223	ENST00000551260	ANTXRL	A6NF34	631 aa		6.6	□□□□□ -1.35

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