RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 TGS1Q96RS0 853 aaKnown RBP14.5□□□□□ -0.09
ERBB3-215ENST00000550828 LSM14BQ9BX40 385 aaKnown RBP14.5□□□□□ -0.09
ERBB3-215ENST00000550828 GANQ9H2C0 597 aa14.5□□□□□ -0.09
ERBB3-215ENST00000550828 GDAP2Q9NXN4 497 aa14.5□□□□□ -0.09
ERBB3-215ENST00000550828 L1RE1Q9UN81 338 aa14.5□□□□□ -0.09
ERBB3-215ENST00000550828 MTCL1Q9Y4B5 1905 aaKnown RBP14.5□□□□□ -0.09
ERBB3-215ENST00000550828 REV3LO60673 3130 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 GRM6O15303 877 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 HCRTO43612 131 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 TADA2AO75478 443 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 TKTP29401 623 aaKnown RBP14.49□□□□□ -0.09
ERBB3-215ENST00000550828 PNPLA4P41247 253 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 CDH8P55286 799 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 CAMK1Q14012 370 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 SOWAHAQ2M3V2 549 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 SGSM1Q2NKQ1 1148 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 UVSSAQ2YD98 709 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 WSCD1Q658N2 575 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 UBR7Q8N806 425 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 SPPL3Q8TCT6 385 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 KBTBD7Q8WVZ9 684 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 RTP3Q9BQQ7 232 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 BCO2Q9BYV7 579 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 ALG13Q9NP73 1137 aaKnown RBP14.49□□□□□ -0.09
ERBB3-215ENST00000550828 NXF1Q9UBU9 619 aaKnown RBP14.49□□□□□ -0.09
ERBB3-215ENST00000550828 PCDHB8Q9UN66 801 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 PCDHB12Q9Y5F1 795 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 PCDHGC5Q9Y5F6 944 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 TIMM13Q9Y5L4 95 aaPredicted RBP14.49□□□□□ -0.09
ERBB3-215ENST00000550828 SNX9Q9Y5X1 595 aa14.49□□□□□ -0.09
ERBB3-215ENST00000550828 SF3B1O75533 1304 aaKnown RBP eCLIP14.48□□□□□ -0.09
ERBB3-215ENST00000550828 RFXAPO00287 272 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 CYB561D2O14569 222 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 FGFR3P22607 806 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 PPM1AP35813 382 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 PLCB3Q01970 1234 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 WDR72Q3MJ13 1102 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 ZNF667Q5HYK9 610 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 RTP2Q5QGT7 225 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 FKBP15Q5T1M5 1219 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 FAM171A1Q5VUB5 890 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 PDCL2Q8N4E4 241 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 GDPD5Q8WTR4 605 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 TAF4BQ92750 862 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 TMEM169Q96HH4 297 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 MRPL45Q9BRJ2 306 aaKnown RBP14.48□□□□□ -0.09
ERBB3-215ENST00000550828 HERC2P3Q9BVR0 1158 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 PLVAPQ9BX97 442 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 NIF3L1Q9GZT8 377 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 AAASQ9NRG9 546 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 HMGXB4Q9UGU5 601 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 FHOD1Q9Y613 1164 aa14.48□□□□□ -0.09
ERBB3-215ENST00000550828 PRRC2BQ5JSZ5 2229 aaKnown RBP14.47□□□□□ -0.09
ERBB3-215ENST00000550828 A0A1W2PQC6 194 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 LPXNO60711 386 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 CYP11A1P05108 521 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 TPM2P07951 284 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 WEE2P0C1S8 567 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 ZNF75DP51815 510 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 ERVFC1P60507 584 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 MYO1EQ12965 1108 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 CCDC142Q17RM4 750 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 FILIP1LQ4L180 1135 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 KLHDC7AQ5VTJ3 777 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 IQCEQ6IPM2 695 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 DSTYKQ6XUX3 929 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 RRAGAQ7L523 313 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 DDX53Q86TM3 631 aaKnown RBP14.47□□□□□ -0.09
ERBB3-215ENST00000550828 FBXO22Q8NEZ5 403 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 AUTS2Q8WXX7 1259 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 ARNTL2Q8WYA1 636 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 SAMD11Q96NU1 681 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 NT5C1BQ96P26 610 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 NAA15Q9BXJ9 866 aaKnown RBP14.47□□□□□ -0.09
ERBB3-215ENST00000550828 GPR88Q9GZN0 384 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 ZBP1Q9H171 429 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 SLC28A3Q9HAS3 691 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 PLCB1Q9NQ66 1216 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 CHST7Q9NS84 486 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 FAM207AQ9NSI2 230 aaPredicted RBP14.47□□□□□ -0.09
ERBB3-215ENST00000550828 RWDD3Q9Y3V2 267 aa14.47□□□□□ -0.09
ERBB3-215ENST00000550828 PATJQ8NI35 1801 aa14.46□□□□□ -0.09
ERBB3-215ENST00000550828 H3BNC9 293 aa14.46□□□□□ -0.09
ERBB3-215ENST00000550828 RNF225M0QZC1 329 aaPredicted RBP14.46□□□□□ -0.09
ERBB3-215ENST00000550828 ADAM12O43184 909 aa14.46□□□□□ -0.09
ERBB3-215ENST00000550828 LILRB3O75022 631 aa14.46□□□□□ -0.09
ERBB3-215ENST00000550828 SOD2P04179 222 aa14.46□□□□□ -0.09
ERBB3-215ENST00000550828 RB1P06400 928 aa14.46□□□□□ -0.09
ERBB3-215ENST00000550828 PNMA6AP0CW24 399 aaPredicted RBP14.46□□□□□ -0.09
ERBB3-215ENST00000550828 ACO1P21399 889 aaKnown RBP14.46□□□□□ -0.09
ERBB3-215ENST00000550828 IRS1P35568 1242 aa14.46□□□□□ -0.09
ERBB3-215ENST00000550828 TNNC1P63316 161 aa14.46□□□□□ -0.09
ERBB3-215ENST00000550828 PLCB2Q00722 1185 aa14.46□□□□□ -0.09
ERBB3-215ENST00000550828 CUL2Q13617 745 aa14.46□□□□□ -0.09
ERBB3-215ENST00000550828 MRPL58Q14197 206 aaKnown RBP14.46□□□□□ -0.09
ERBB3-215ENST00000550828 VARS2Q5ST30 1063 aaKnown RBP14.46□□□□□ -0.09
ERBB3-215ENST00000550828 KIAA0319Q5VV43 1072 aa14.46□□□□□ -0.09
ERBB3-215ENST00000550828 PRSS55Q6UWB4 352 aaPredicted RBP14.46□□□□□ -0.09
ERBB3-215ENST00000550828 RSPO2Q6UXX9 243 aaPredicted RBP14.46□□□□□ -0.09
ERBB3-215ENST00000550828 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms