RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 HLA-DOAP06340 250 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 IVLP07476 585 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 SPATA31D3P0C874 917 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 ITGAMP11215 1152 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 TNNT1P13805 278 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 GSPT1P15170 499 aaKnown RBP3.78□□□□□ -1.8
CCNT1-203ENST00000550457 PDCP20941 246 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 CTSSP25774 331 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 GSDMDP57764 484 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 BLOC1S1P78537 153 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 NFE2L2Q16236 605 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 TPD52L1Q16890 204 aaPredicted RBP3.78□□□□□ -1.8
CCNT1-203ENST00000550457 ERCC6LQ2NKX8 1250 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 TKFCQ3LXA3 575 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 PITRM1Q5JRX3 1037 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 SARM1Q6SZW1 724 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 SPATA31D4Q6ZUB0 917 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 RPAINQ86UA6 219 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 ZGPATQ8N5A5 531 aaKnown RBP3.78□□□□□ -1.8
CCNT1-203ENST00000550457 OR56A1Q8NGH5 318 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 RSAD2Q8WXG1 361 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 TSR2Q969E8 191 aaKnown RBP3.78□□□□□ -1.8
CCNT1-203ENST00000550457 MRFAP1L1Q96HT8 127 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 ZSCAN31Q96LW9 406 aaPredicted RBP3.78□□□□□ -1.8
CCNT1-203ENST00000550457 DDX19AQ9NUU7 478 aaKnown RBP3.78□□□□□ -1.8
CCNT1-203ENST00000550457 CDY2AQ9Y6F7 541 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 MYO5CQ9NQX4 1742 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 ZFYVE9O95405 1425 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 PREX2Q70Z35 1606 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 RPAP1Q9BWH6 1393 aaPredicted RBP3.77□□□□□ -1.81
CCNT1-203ENST00000550457 PTPRCP08575 1304 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 PNPLA7Q6ZV29 1317 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 CCDC78A2IDD5 438 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 CTAGE5O15320 804 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 STX6O43752 255 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 KDM1AO60341 852 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 C1QL1O75973 258 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 CDKL5O76039 1030 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 MATN4O95460 622 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 ZNF853P0CG23 659 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 CDK4P11802 303 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 H2AFXP16104 143 aaPredicted RBP3.77□□□□□ -1.81
CCNT1-203ENST00000550457 ADCYAP1R1P41586 468 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 ZNF75DP51815 510 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 ELLP55199 621 aaPredicted RBP3.77□□□□□ -1.81
CCNT1-203ENST00000550457 MEF2AQ02078 507 aaPredicted RBP3.77□□□□□ -1.81
CCNT1-203ENST00000550457 PTPN14Q15678 1187 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 JAKMIP3Q5VZ66 844 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 B3GNTL1Q67FW5 361 aaPredicted RBP3.77□□□□□ -1.81
CCNT1-203ENST00000550457 SP5Q6BEB4 398 aaPredicted RBP3.77□□□□□ -1.81
CCNT1-203ENST00000550457 ZSCAN25Q6NSZ9 544 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 CNNM4Q6P4Q7 775 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 RBM43Q6ZSC3 357 aaKnown RBP3.77□□□□□ -1.81
CCNT1-203ENST00000550457 FRMD7Q6ZUT3 714 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 PLA2G4DQ86XP0 818 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 IQUBQ8NA54 791 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 REPS2Q8NFH8 660 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 OR14C36Q8NHC7 312 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 TDRD7Q8NHU6 1098 aaKnown RBP3.77□□□□□ -1.81
CCNT1-203ENST00000550457 PHACTR3Q96KR7 559 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 Q96MF0 132 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 UTP14AQ9BVJ6 771 aaKnown RBP3.77□□□□□ -1.81
CCNT1-203ENST00000550457 WNT8AQ9H1J5 351 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 KCTD10Q9H3F6 313 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 KLHL11Q9NVR0 708 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.77□□□□□ -1.81
CCNT1-203ENST00000550457 RNF181Q9P0P0 153 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 FEZ2Q9UHY8 353 aaPredicted RBP3.77□□□□□ -1.81
CCNT1-203ENST00000550457 TLK1Q9UKI8 766 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 PYCARDQ9ULZ3 195 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 LIMCH1Q9UPQ0 1083 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 CEP152O94986 1710 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 FANCAO15360 1455 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 MRC2Q9UBG0 1479 aa3.77□□□□□ -1.81
CCNT1-203ENST00000550457 CPSF1Q10570 1443 aaKnown RBP3.77□□□□□ -1.81
CCNT1-203ENST00000550457 ATRNL1Q5VV63 1379 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 COL11A2P13942 1736 aaPredicted RBP3.76□□□□□ -1.81
CCNT1-203ENST00000550457 CXorf49A8MYA2 514 aaPredicted RBP3.76□□□□□ -1.81
CCNT1-203ENST00000550457 GASTP01350 101 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 IGLV2-14P01704 120 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 LPLP06858 475 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 TUBBP07437 444 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 CAPN2P17655 700 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 CASQ1P31415 396 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 LSSP48449 732 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 LGALS4P56470 323 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 SIM1P81133 766 aaPredicted RBP3.76□□□□□ -1.81
CCNT1-203ENST00000550457 ZNF169Q14929 603 aaPredicted RBP3.76□□□□□ -1.81
CCNT1-203ENST00000550457 SF3A1Q15459 793 aaKnown RBP3.76□□□□□ -1.81
CCNT1-203ENST00000550457 DDB1Q16531 1140 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 ATXN7L2Q5T6C5 722 aaPredicted RBP3.76□□□□□ -1.81
CCNT1-203ENST00000550457 EFCAB2Q5VUJ9 269 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 BROXQ5VW32 411 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 ICE2Q659A1 982 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 TMCO3Q6UWJ1 677 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 CCDC186Q7Z3E2 898 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 MAPKAPK5Q8IW41 473 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 RHOT2Q8IXI1 618 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 DRC7Q8IY82 874 aa3.76□□□□□ -1.81
CCNT1-203ENST00000550457 TMEM132CQ8N3T6 1108 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms