RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 BLOC1S6Q9UL45 172 aa16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 FNDC3AQ9Y2H6 1198 aaKnown RBP16.57■□□□□ 0.24
RBFOX1-212ENST00000550418 TRIM16LQ309B1 348 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 ADCK1Q86TW2 530 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 OR6B3Q8NGW1 331 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 CYGBQ8WWM9 190 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 ATG4AQ8WYN0 398 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 RBAKQ9NYW8 714 aaPredicted RBP16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 PCDHB2Q9Y5E7 798 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 MYO3BQ8WXR4 1341 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 A0A0U1RQJ8 604 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 PMS1P54277 932 aaKnown RBP16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 ZNF571Q7Z3V5 609 aaPredicted RBP16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 PPIL6Q8IXY8 311 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 EIF1ADQ8N9N8 165 aaKnown RBP16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 CLMNQ96JQ2 1002 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 DHX35Q9H5Z1 703 aaKnown RBP16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 APOL1O14791 398 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 AP1G2O75843 785 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 MYBL2P10244 700 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 SLC27A3Q5K4L6 730 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 ATP8B4Q8TF62 1192 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 UNC45AQ9H3U1 944 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 OSGEPQ9NPF4 335 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 RFC5P40937 340 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 ITGB3BPQ13352 177 aaPredicted RBP16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 PIGHQ14442 188 aaPredicted RBP16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 ZC2HC1CQ53FD0 456 aaPredicted RBP16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 FBXL16Q8N461 479 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 PPP2R3CQ969Q6 453 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 INTS13Q9NVM9 706 aa16.56■□□□□ 0.24
RBFOX1-212ENST00000550418 NEURL4Q96JN8 1562 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 TBX3O15119 743 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 ANGPT2O15123 496 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 RIPK2O43353 540 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 CCDC159P0C7I6 412 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 FAM200BP0CF97 657 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 RBP3P10745 1247 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 LMBRD2Q68DH5 695 aaPredicted RBP16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 PRCCQ92733 491 aaPredicted RBP16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 ABCF3Q9NUQ8 709 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 KDM4FA0A1W2PPD8 638 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 CES2O00748 559 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 P4HA2O15460 535 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 DDR1Q08345 913 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 MAPK6Q16659 721 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 NCAPG2Q86XI2 1143 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 NLRP4Q96MN2 994 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 CATSPER2Q96P56 530 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 SIKE1Q9BRV8 207 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 AGO2Q9UKV8 859 aaKnown RBP16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 NAALADL1Q9UQQ1 740 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 F5H6K3 240 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 KLRC3Q07444 240 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 RASA2Q15283 850 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 TTC33Q6PID6 262 aaPredicted RBP16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 LZICQ8WZA0 190 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 KLHL4Q9C0H6 718 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 RNPEPL1Q9HAU8 725 aa16.55■□□□□ 0.24
RBFOX1-212ENST00000550418 USP32Q8NFA0 1604 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 EIF3DO15371 548 aaKnown RBP eCLIP16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 EPHB2P29323 1055 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 PSMC5P62195 406 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 GRB10Q13322 594 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 TMEM237Q96Q45 408 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 AP4S1Q9Y587 144 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 RIMS1Q86UR5 1692 aaKnown RBP16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 M0R3G1 203 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 PJA2O43164 708 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 CST8O60676 142 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 SERPINB1P30740 379 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 NLRP11P59045 1033 aaKnown RBP16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 PID1Q7Z2X4 250 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 RNF135Q8IUD6 432 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 PRPF18Q99633 342 aaKnown RBP16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 MRGBPQ9NV56 204 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 FOXN3O00409 490 aaPredicted RBP16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 CSF1RP07333 972 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 SFNP31947 248 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 LRRC8BQ6P9F7 803 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 IYDQ6PHW0 289 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 EP400NLQ6ZTU2 488 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 LRRC6Q86X45 466 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 CENPTQ96BT3 561 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 MCEEQ96PE7 176 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 FSD1LQ9BXM9 530 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 FAM192AQ9GZU8 254 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 C2CD2Q9Y426 696 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 AKR1B1P15121 316 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 ATP4AP20648 1035 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 TNFRSF8P28908 595 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 ITPK1Q13572 414 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 SNRNP35Q16560 246 aaKnown RBP16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 GPR141Q7Z602 305 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 RMDN3Q96TC7 470 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 PAK5Q9P286 719 aa16.54■□□□□ 0.24
RBFOX1-212ENST00000550418 RPA1P27694 616 aa16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 NFX1Q12986 1120 aaKnown RBP16.53■□□□□ 0.24
RBFOX1-212ENST00000550418 RWDD4Q6NW29 188 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms