RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 UROC1Q96N76 676 aa15.13■□□□□ 0.01
CACNB3-216ENST00000550391 NIF3L1Q9GZT8 377 aa15.13■□□□□ 0.01
CACNB3-216ENST00000550391 TBC1D13Q9NVG8 400 aa15.13■□□□□ 0.01
CACNB3-216ENST00000550391 AIPL1Q9NZN9 384 aa15.13■□□□□ 0.01
CACNB3-216ENST00000550391 PTPRSQ13332 1948 aa15.13■□□□□ 0.01
CACNB3-216ENST00000550391 COL4A6Q14031 1691 aa15.12■□□□□ 0.01
CACNB3-216ENST00000550391 CASTOR2A6NHX0 329 aa15.12■□□□□ 0.01
CACNB3-216ENST00000550391 F8VZ95 297 aa15.12■□□□□ 0.01
CACNB3-216ENST00000550391 PODXLO00592 558 aa15.12■□□□□ 0.01
CACNB3-216ENST00000550391 NRDCO43847 1150 aa15.12■□□□□ 0.01
CACNB3-216ENST00000550391 DGKIO75912 1065 aa15.12■□□□□ 0.01
CACNB3-216ENST00000550391 DDHD2O94830 711 aa15.12■□□□□ 0.01
CACNB3-216ENST00000550391 UPP2O95045 317 aa15.12■□□□□ 0.01
CACNB3-216ENST00000550391 HNRNPH3P31942 346 aaKnown RBP15.12■□□□□ 0.01
CACNB3-216ENST00000550391 SOX5P35711 763 aa15.12■□□□□ 0.01
CACNB3-216ENST00000550391 ASPAP45381 313 aa15.12■□□□□ 0.01
CACNB3-216ENST00000550391 CLCNKBP51801 687 aa15.12■□□□□ 0.01
CACNB3-216ENST00000550391 UPP1Q16831 310 aa15.12■□□□□ 0.01
CACNB3-216ENST00000550391 WDR72Q3MJ13 1102 aa15.12■□□□□ 0.01
CACNB3-216ENST00000550391 HS1BP3Q53T59 392 aa15.12■□□□□ 0.01
CACNB3-216ENST00000550391 PSRC1Q6PGN9 363 aaPredicted RBP15.12■□□□□ 0.01
CACNB3-216ENST00000550391 ZNF280BQ86YH2 543 aa15.12■□□□□ 0.01
CACNB3-216ENST00000550391 SHC3Q92529 594 aa15.12■□□□□ 0.01
CACNB3-216ENST00000550391 TRIM44Q96DX7 344 aaPredicted RBP15.12■□□□□ 0.01
CACNB3-216ENST00000550391 NECAB3Q96P71 396 aaPredicted RBP15.12■□□□□ 0.01
CACNB3-216ENST00000550391 FAM193BQ96PV7 902 aaPredicted RBP15.12■□□□□ 0.01
CACNB3-216ENST00000550391 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.12■□□□□ 0.01
CACNB3-216ENST00000550391 CACNG4Q9UBN1 327 aa15.12■□□□□ 0.01
CACNB3-216ENST00000550391 NXF1Q9UBU9 619 aaKnown RBP15.12■□□□□ 0.01
CACNB3-216ENST00000550391 SCN1AP35498 2009 aa15.12■□□□□ 0.01
CACNB3-216ENST00000550391 XIRP2A4UGR9 3374 aa15.11■□□□□ 0.01
CACNB3-216ENST00000550391 TCF20Q9UGU0 1960 aaKnown RBP15.11■□□□□ 0.01
CACNB3-216ENST00000550391 TBKBP1A7MCY6 615 aa15.11■□□□□ 0.01
CACNB3-216ENST00000550391 FOXN3O00409 490 aaPredicted RBP15.11■□□□□ 0.01
CACNB3-216ENST00000550391 B4GALT3O60512 393 aa15.11■□□□□ 0.01
CACNB3-216ENST00000550391 CCDC172P0C7W6 258 aa15.11■□□□□ 0.01
CACNB3-216ENST00000550391 FECHP22830 423 aa15.11■□□□□ 0.01
CACNB3-216ENST00000550391 PAX3P23760 479 aa15.11■□□□□ 0.01
CACNB3-216ENST00000550391 KCNJ6P48051 423 aa15.11■□□□□ 0.01
CACNB3-216ENST00000550391 TAF6P49848 677 aa15.11■□□□□ 0.01
CACNB3-216ENST00000550391 YWHAEP62258 255 aaKnown RBP15.11■□□□□ 0.01
CACNB3-216ENST00000550391 TNNC1P63316 161 aa15.11■□□□□ 0.01
CACNB3-216ENST00000550391 RNASELQ05823 741 aaKnown RBP15.11■□□□□ 0.01
CACNB3-216ENST00000550391 ASIC2Q16515 512 aa15.11■□□□□ 0.01
CACNB3-216ENST00000550391 SV2CQ496J9 727 aa15.11■□□□□ 0.01
CACNB3-216ENST00000550391 COLGALT2Q8IYK4 626 aa15.11■□□□□ 0.01
CACNB3-216ENST00000550391 UBR7Q8N806 425 aa15.11■□□□□ 0.01
CACNB3-216ENST00000550391 ZNF689Q96CS4 500 aaPredicted RBP15.11■□□□□ 0.01
CACNB3-216ENST00000550391 ARID3AQ99856 593 aa15.11■□□□□ 0.01
CACNB3-216ENST00000550391 BAG1Q99933 345 aaPredicted RBP15.11■□□□□ 0.01
CACNB3-216ENST00000550391 PAAF1Q9BRP4 392 aa15.11■□□□□ 0.01
CACNB3-216ENST00000550391 MRPL9Q9BYD2 267 aaKnown RBP15.11■□□□□ 0.01
CACNB3-216ENST00000550391 BCO2Q9BYV7 579 aa15.11■□□□□ 0.01
CACNB3-216ENST00000550391 CYP3A43Q9HB55 503 aa15.11■□□□□ 0.01
CACNB3-216ENST00000550391 POLIQ9UNA4 740 aa15.11■□□□□ 0.01
CACNB3-216ENST00000550391 MYO9BQ13459 2157 aa15.1■□□□□ 0.01
CACNB3-216ENST00000550391 KPNA7A9QM74 516 aa15.1■□□□□ 0.01
CACNB3-216ENST00000550391 SPTLC1O15269 473 aa15.1■□□□□ 0.01
CACNB3-216ENST00000550391 FERP16591 822 aa15.1■□□□□ 0.01
CACNB3-216ENST00000550391 ACO1P21399 889 aaKnown RBP15.1■□□□□ 0.01
CACNB3-216ENST00000550391 IGFBP6P24592 240 aaPredicted RBP15.1■□□□□ 0.01
CACNB3-216ENST00000550391 LILRA4P59901 499 aa15.1■□□□□ 0.01
CACNB3-216ENST00000550391 CDK17Q00537 523 aa15.1■□□□□ 0.01
CACNB3-216ENST00000550391 MEA1Q16626 185 aa15.1■□□□□ 0.01
CACNB3-216ENST00000550391 E4F1Q66K89 784 aaPredicted RBP15.1■□□□□ 0.01
CACNB3-216ENST00000550391 WDR59Q6PJI9 974 aa15.1■□□□□ 0.01
CACNB3-216ENST00000550391 TMTC1Q8IUR5 882 aa15.1■□□□□ 0.01
CACNB3-216ENST00000550391 TMEM139Q8IV31 216 aa15.1■□□□□ 0.01
CACNB3-216ENST00000550391 C3orf58Q8NDZ4 430 aa15.1■□□□□ 0.01
CACNB3-216ENST00000550391 HERVK_113Q902F9 699 aa15.1■□□□□ 0.01
CACNB3-216ENST00000550391 ZNF830Q96NB3 372 aaPredicted RBP15.1■□□□□ 0.01
CACNB3-216ENST00000550391 FAM124BQ9H5Z6 455 aaPredicted RBP15.1■□□□□ 0.01
CACNB3-216ENST00000550391 NRDE2Q9H7Z3 1164 aa15.1■□□□□ 0.01
CACNB3-216ENST00000550391 RC3H2Q9HBD1 1191 aaKnown RBP15.1■□□□□ 0.01
CACNB3-216ENST00000550391 GDAP2Q9NXN4 497 aa15.1■□□□□ 0.01
CACNB3-216ENST00000550391 CHD9Q3L8U1 2897 aa15.1■□□□□ 0.01
CACNB3-216ENST00000550391 ZBBXA8MT70 800 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 GFPT2O94808 682 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 SERPING1P05155 500 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 PNMA6AP0CW24 399 aaPredicted RBP15.09■□□□□ 0.01
CACNB3-216ENST00000550391 USP8P40818 1118 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 AARSP49588 968 aaKnown RBP eCLIP15.09■□□□□ 0.01
CACNB3-216ENST00000550391 ARID5AQ03989 594 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 CCDC85BQ15834 202 aaPredicted RBP15.09■□□□□ 0.01
CACNB3-216ENST00000550391 DCLRE1AQ6PJP8 1040 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 CD300LGQ6UXG3 332 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 CYP26C1Q6V0L0 522 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 SCARA5Q6ZMJ2 495 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 LIMS2Q7Z4I7 341 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 IRF2BP2Q7Z5L9 587 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 TMCO2Q7Z6W1 182 aaPredicted RBP15.09■□□□□ 0.01
CACNB3-216ENST00000550391 FAM71AQ8IYT1 594 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 LRRC43Q8N309 656 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 TTC39CQ8N584 583 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 RABGGTAQ92696 567 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 MMS19Q96T76 1030 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 SDCBP2Q9H190 292 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 KCNF1Q9H3M0 494 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 DNAJB4Q9UDY4 337 aa15.09■□□□□ 0.01
CACNB3-216ENST00000550391 CNTN6Q9UQ52 1028 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms