RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 KIF12Q96FN5 646 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 SLITRK6Q9H5Y7 841 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 SH2B1Q9NRF2 756 aaPredicted RBP13.7□□□□□ -0.22
LETMD1-222ENST00000550274 PPP4R2Q9NY27 417 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 USP18Q9UMW8 372 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 KIAA1549LQ6ZVL6 1849 aa13.69□□□□□ -0.22
LETMD1-222ENST00000550274 FAM189A1O60320 539 aa13.69□□□□□ -0.22
LETMD1-222ENST00000550274 CLTAP09496 248 aa13.69□□□□□ -0.22
LETMD1-222ENST00000550274 MATR3P43243 847 aaKnown RBP eCLIP13.69□□□□□ -0.22
LETMD1-222ENST00000550274 SOX9P48436 509 aa13.69□□□□□ -0.22
LETMD1-222ENST00000550274 CCR3P51677 355 aa13.69□□□□□ -0.22
LETMD1-222ENST00000550274 SMTNP53814 917 aa13.69□□□□□ -0.22
LETMD1-222ENST00000550274 ATP2C1P98194 919 aaPredicted RBP13.69□□□□□ -0.22
LETMD1-222ENST00000550274 LMNB2Q03252 620 aa13.69□□□□□ -0.22
LETMD1-222ENST00000550274 TTC9BQ8N6N2 239 aa13.69□□□□□ -0.22
LETMD1-222ENST00000550274 IER2Q9BTL4 223 aa13.69□□□□□ -0.22
LETMD1-222ENST00000550274 MKNK1Q9BUB5 465 aa13.69□□□□□ -0.22
LETMD1-222ENST00000550274 PLEKHA5Q9HAU0 1116 aa13.69□□□□□ -0.22
LETMD1-222ENST00000550274 RBM12Q9NTZ6 932 aaKnown RBP13.69□□□□□ -0.22
LETMD1-222ENST00000550274 GMEB2Q9UKD1 530 aa13.69□□□□□ -0.22
LETMD1-222ENST00000550274 CDV3Q9UKY7 258 aaKnown RBP13.69□□□□□ -0.22
LETMD1-222ENST00000550274 UBQLN1Q9UMX0 589 aaKnown RBP13.69□□□□□ -0.22
LETMD1-222ENST00000550274 ANAPC1Q9H1A4 1944 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 USP24Q9UPU5 2620 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 MTMR11A4FU01 709 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 SLC38A8A6NNN8 435 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 LACTBL1A8MY62 500 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 PRR5-ARHGAP8B1AHC4 643 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 EIF5BO60841 1220 aaKnown RBP13.68□□□□□ -0.22
LETMD1-222ENST00000550274 SOAT2O75908 522 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 PLA2G4BP0C869 781 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 CYP3A5P20815 502 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 NRLP54845 237 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 NCKAP1LP55160 1127 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 ARHGAP8P85298 464 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 PPP2R3AQ06190 1150 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 DMWDQ09019 674 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 FCHO2Q0JRZ9 810 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 SPEM2Q0P670 501 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 GPR17Q13304 367 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 ENOX2Q16206 610 aaKnown RBP13.68□□□□□ -0.22
LETMD1-222ENST00000550274 ARSHQ5FYA8 562 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 CENPPQ6IPU0 288 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 TXNDC11Q6PKC3 985 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 ATAD1Q8NBU5 361 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 BICD1Q96G01 975 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 LRRC3BQ96PB8 259 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 TMEM209Q96SK2 561 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 GPR88Q9GZN0 384 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 SLC27A5Q9Y2P5 690 aa13.68□□□□□ -0.22
LETMD1-222ENST00000550274 DCDC2BA2VCK2 349 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 VWA3AA6NCI4 1184 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 OR6C75A6NL08 312 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 CHADO15335 359 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 SDHBP21912 280 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 HOXC13P31276 330 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 CXCL12P48061 93 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 EPHB3P54753 998 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 MLLT6P55198 1093 aaPredicted RBP13.67□□□□□ -0.22
LETMD1-222ENST00000550274 SRSF5Q13243 272 aaKnown RBP13.67□□□□□ -0.22
LETMD1-222ENST00000550274 PLD1Q13393 1074 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 PPP2R5DQ14738 602 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 TMEM119Q4V9L6 283 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 LAIR1Q6GTX8 287 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 OVOS1Q6IE37 1185 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 DSTYKQ6XUX3 929 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 PRR23BQ6ZRT6 265 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 Q6ZS52 159 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 GAREM2Q75VX8 874 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 HAUS6Q7Z4H7 955 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 USP37Q86T82 979 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 ARID3BQ8IVW6 561 aaPredicted RBP13.67□□□□□ -0.22
LETMD1-222ENST00000550274 YAF2Q8IY57 180 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 CSGALNACT1Q8TDX6 532 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 LRRC15Q8TF66 581 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 E2F7Q96AV8 911 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 ZFYVE19Q96K21 471 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 CNTNAP3BQ96NU0 1288 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 CNTNAP3Q9BZ76 1288 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 C2orf42Q9NWW7 574 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 KCND2Q9NZV8 630 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 KCNG1Q9UIX4 513 aa13.67□□□□□ -0.22
LETMD1-222ENST00000550274 HELZP42694 1942 aaKnown RBP13.66□□□□□ -0.22
LETMD1-222ENST00000550274 CHURC1-FNTBB4DL54 471 aa13.66□□□□□ -0.22
LETMD1-222ENST00000550274 K7ESF4 209 aa13.66□□□□□ -0.22
LETMD1-222ENST00000550274 HNRNPDLO14979 420 aaKnown RBP13.66□□□□□ -0.22
LETMD1-222ENST00000550274 HRO43593 1189 aa13.66□□□□□ -0.22
LETMD1-222ENST00000550274 ADRB2P07550 413 aa13.66□□□□□ -0.22
LETMD1-222ENST00000550274 TYMPP19971 482 aa13.66□□□□□ -0.22
LETMD1-222ENST00000550274 CTHP32929 405 aa13.66□□□□□ -0.22
LETMD1-222ENST00000550274 ALDH1A3P47895 512 aa13.66□□□□□ -0.22
LETMD1-222ENST00000550274 FNTBP49356 437 aa13.66□□□□□ -0.22
LETMD1-222ENST00000550274 LIG4P49917 911 aa13.66□□□□□ -0.22
LETMD1-222ENST00000550274 CDR1P51861 262 aa13.66□□□□□ -0.22
LETMD1-222ENST00000550274 KPNA1P52294 538 aaPredicted RBP13.66□□□□□ -0.22
LETMD1-222ENST00000550274 LILRA4P59901 499 aa13.66□□□□□ -0.22
LETMD1-222ENST00000550274 MYBPC2Q14324 1141 aa13.66□□□□□ -0.22
LETMD1-222ENST00000550274 RILPL1Q5EBL4 403 aa13.66□□□□□ -0.22
LETMD1-222ENST00000550274 MCTP1Q6DN14 999 aa13.66□□□□□ -0.22
LETMD1-222ENST00000550274 DNAJB7Q7Z6W7 309 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms