RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 STX17P56962 302 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 KCNC3Q14003 757 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 SGSM1Q2NKQ1 1148 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 CCDC40Q4G0X9 1142 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 TCERG1LQ5VWI1 586 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 TTI2Q6NXR4 508 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 FRMD5Q7Z6J6 570 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 TMEM86AQ8N2M4 240 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 TMEM130Q8N3G9 435 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 MMS19Q96T76 1030 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 IMPG2Q9BZV3 1241 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 SIX4Q9UIU6 781 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 BARX2Q9UMQ3 279 aaPredicted RBP16.08■□□□□ 0.16
GPN3-206ENST00000549963 SNX9Q9Y5X1 595 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 PTPRJQ12913 1337 aa16.08■□□□□ 0.16
GPN3-206ENST00000549963 H3BQ06 376 aaPredicted RBP16.07■□□□□ 0.16
GPN3-206ENST00000549963 TGM5O43548 720 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 GLP2RO95838 553 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 CST3P01034 146 aaPredicted RBP16.07■□□□□ 0.16
GPN3-206ENST00000549963 C4BPAP04003 597 aaKnown RBP16.07■□□□□ 0.16
GPN3-206ENST00000549963 CCDC192P0DO97 292 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 P4HA1P13674 534 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 TNNC1P63316 161 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 DLG4P78352 724 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 TFF2Q03403 129 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 ITIH3Q06033 890 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 NCOA4Q13772 614 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 LIN9Q5TKA1 542 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 TPGS2Q68CL5 300 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 SLC8B1Q6J4K2 584 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 RTL10Q7L3V2 364 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 ZC3H3Q8IXZ2 948 aaKnown RBP16.07■□□□□ 0.16
GPN3-206ENST00000549963 TOP6BLQ8N6T0 577 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 KREMEN2Q8NCW0 462 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 ZNF461Q8TAF7 563 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 SPATA18Q8TC71 538 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 PLEKHO2Q8TD55 490 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 TAF4BQ92750 862 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 ASB2Q96Q27 587 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 SRRTQ9BXP5 876 aaKnown RBP16.07■□□□□ 0.16
GPN3-206ENST00000549963 CLEC1BQ9P126 229 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 FBXL5Q9UKA1 691 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 MAFFQ9ULX9 164 aa16.07■□□□□ 0.16
GPN3-206ENST00000549963 COL6A3P12111 3177 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 BRWD1Q9NSI6 2320 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 TBX10O75333 385 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 LETM1O95202 739 aaPredicted RBP16.06■□□□□ 0.16
GPN3-206ENST00000549963 STAU1O95793 577 aaKnown RBP16.06■□□□□ 0.16
GPN3-206ENST00000549963 FAM163BP0C2L3 166 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 SPATA31D3P0C874 917 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 CPB1P15086 417 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 ERCC5P28715 1186 aaPredicted RBP16.06■□□□□ 0.16
GPN3-206ENST00000549963 LHX1P48742 406 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 MYL7Q01449 175 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 DLX2Q07687 328 aaPredicted RBP16.06■□□□□ 0.16
GPN3-206ENST00000549963 SKOR2Q2VWA4 1001 aaPredicted RBP16.06■□□□□ 0.16
GPN3-206ENST00000549963 UVSSAQ2YD98 709 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 WDR72Q3MJ13 1102 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 ZACNQ401N2 412 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 DCAF17Q5H9S7 520 aaPredicted RBP16.06■□□□□ 0.16
GPN3-206ENST00000549963 TDRD10Q5VZ19 366 aaKnown RBP16.06■□□□□ 0.16
GPN3-206ENST00000549963 WSCD1Q658N2 575 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 KRT39Q6A163 491 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 PTCRAQ6ISU1 281 aaPredicted RBP16.06■□□□□ 0.16
GPN3-206ENST00000549963 LILRA6Q6PI73 481 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 SPATA31D4Q6ZUB0 917 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 CCDC149Q6ZUS6 474 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 SV2AQ7L0J3 742 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 VN1R2Q8NFZ6 395 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 CXorf38Q8TB03 319 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 BORCS6Q96GS4 357 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 MSLNLQ96KJ4 702 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 DUSP9Q99956 384 aaKnown RBP16.06■□□□□ 0.16
GPN3-206ENST00000549963 MMRN2Q9H8L6 949 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 SFXN1Q9H9B4 322 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 TMEM8AQ9HCN3 771 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 MAN1C1Q9NR34 630 aa16.06■□□□□ 0.16
GPN3-206ENST00000549963 TBC1D4O60343 1298 aa16.05■□□□□ 0.16
GPN3-206ENST00000549963 TRIM49P0CI25 452 aa16.05■□□□□ 0.16
GPN3-206ENST00000549963 TRIM49CP0CI26 452 aa16.05■□□□□ 0.16
GPN3-206ENST00000549963 PIK3CAP42336 1068 aa16.05■□□□□ 0.16
GPN3-206ENST00000549963 GCLMP48507 274 aa16.05■□□□□ 0.16
GPN3-206ENST00000549963 MCCD1P59942 119 aaPredicted RBP16.05■□□□□ 0.16
GPN3-206ENST00000549963 MYL6P60660 151 aa16.05■□□□□ 0.16
GPN3-206ENST00000549963 RBM10P98175 930 aaKnown RBP16.05■□□□□ 0.16
GPN3-206ENST00000549963 TSPY1Q01534 308 aa16.05■□□□□ 0.16
GPN3-206ENST00000549963 CETN1Q12798 172 aa16.05■□□□□ 0.16
GPN3-206ENST00000549963 SMARCB1Q12824 385 aa16.05■□□□□ 0.16
GPN3-206ENST00000549963 SMAD4Q13485 552 aaKnown RBP16.05■□□□□ 0.16
GPN3-206ENST00000549963 CLUL1Q15846 466 aa16.05■□□□□ 0.16
GPN3-206ENST00000549963 ZNF699Q32M78 642 aa16.05■□□□□ 0.16
GPN3-206ENST00000549963 ZNF667Q5HYK9 610 aa16.05■□□□□ 0.16
GPN3-206ENST00000549963 ATAT1Q5SQI0 421 aa16.05■□□□□ 0.16
GPN3-206ENST00000549963 CYP26C1Q6V0L0 522 aa16.05■□□□□ 0.16
GPN3-206ENST00000549963 RBM43Q6ZSC3 357 aaKnown RBP16.05■□□□□ 0.16
GPN3-206ENST00000549963 CREBRFQ8IUR6 639 aa16.05■□□□□ 0.16
GPN3-206ENST00000549963 FAM114A1Q8IWE2 563 aa16.05■□□□□ 0.16
GPN3-206ENST00000549963 DCP1BQ8IZD4 617 aaKnown RBP16.05■□□□□ 0.16
GPN3-206ENST00000549963 FAM84AQ96KN4 292 aa16.05■□□□□ 0.16
GPN3-206ENST00000549963 RIPOR3Q96MK2 946 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms