RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 LTBP2Q14767 1821 aa18.6■□□□□ 0.57
LETMD1-220ENST00000549686 MICAL3Q7RTP6 2002 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 ZBBXA8MT70 800 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 RBAK-RBAKDNI3L0D1 243 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 SPTLC1O15269 473 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 TRAPPC3O43617 180 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 DDHD2O94830 711 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 UPP2O95045 317 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 ALDH2P05091 517 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 WEE2P0C1S8 567 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 PDE6CP51160 858 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 ZNF132P52740 706 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 DEFB103AP81534 67 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 ARID5AQ03989 594 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 TMEM270Q6UE05 265 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 SCARA5Q6ZMJ2 495 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 UNC93AQ86WB7 457 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 ZNF280BQ86YH2 543 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 RBBP8NLQ8NC74 664 aaPredicted RBP18.59■□□□□ 0.57
LETMD1-220ENST00000549686 ELMO3Q96BJ8 720 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 ZNF689Q96CS4 500 aaPredicted RBP18.59■□□□□ 0.57
LETMD1-220ENST00000549686 SLC9A7Q96T83 725 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 DEF6Q9H4E7 631 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 NHEJ1Q9H9Q4 299 aaPredicted RBP18.59■□□□□ 0.57
LETMD1-220ENST00000549686 ARHGAP20Q9P2F6 1191 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.59■□□□□ 0.575e-7■■■■□ 26.2
LETMD1-220ENST00000549686 ALPK3Q96L96 1907 aa18.59■□□□□ 0.57
LETMD1-220ENST00000549686 CYP26A1O43174 497 aa18.58■□□□□ 0.56
LETMD1-220ENST00000549686 CILPO75339 1184 aa18.58■□□□□ 0.56
LETMD1-220ENST00000549686 IPO7O95373 1038 aaKnown RBP18.58■□□□□ 0.56
LETMD1-220ENST00000549686 PAEPP09466 180 aa18.58■□□□□ 0.56
LETMD1-220ENST00000549686 SYN1P17600 705 aa18.58■□□□□ 0.56
LETMD1-220ENST00000549686 CD58P19256 250 aa18.58■□□□□ 0.56
LETMD1-220ENST00000549686 OR1G1P47890 313 aa18.58■□□□□ 0.56
LETMD1-220ENST00000549686 DSTYKQ6XUX3 929 aa18.58■□□□□ 0.56
LETMD1-220ENST00000549686 TMEM130Q8N3G9 435 aa18.58■□□□□ 0.56
LETMD1-220ENST00000549686 SENP8Q96LD8 212 aa18.58■□□□□ 0.56
LETMD1-220ENST00000549686 CHP1Q99653 195 aa18.58■□□□□ 0.56
LETMD1-220ENST00000549686 HAUS4Q9H6D7 363 aa18.58■□□□□ 0.56
LETMD1-220ENST00000549686 NRDE2Q9H7Z3 1164 aa18.58■□□□□ 0.56
LETMD1-220ENST00000549686 KIAA1257Q9ULG3 409 aa18.58■□□□□ 0.56
LETMD1-220ENST00000549686 M0QZQ0 153 aa18.57■□□□□ 0.56
LETMD1-220ENST00000549686 CYB561D2O14569 222 aa18.57■□□□□ 0.56
LETMD1-220ENST00000549686 PNMA6AP0CW24 399 aaPredicted RBP18.57■□□□□ 0.56
LETMD1-220ENST00000549686 ODC1P11926 461 aa18.57■□□□□ 0.56
LETMD1-220ENST00000549686 CYP11B1P15538 503 aa18.57■□□□□ 0.56
LETMD1-220ENST00000549686 WARSP23381 471 aaKnown RBP18.57■□□□□ 0.56
LETMD1-220ENST00000549686 CLCN1P35523 988 aa18.57■□□□□ 0.56
LETMD1-220ENST00000549686 GATMP50440 423 aa18.57■□□□□ 0.56
LETMD1-220ENST00000549686 ELAVL2Q12926 359 aaKnown RBP18.57■□□□□ 0.56
LETMD1-220ENST00000549686 SOWAHAQ2M3V2 549 aa18.57■□□□□ 0.56
LETMD1-220ENST00000549686 SUSD3Q96L08 255 aa18.57■□□□□ 0.56
LETMD1-220ENST00000549686 ZNF830Q96NB3 372 aaPredicted RBP18.57■□□□□ 0.56
LETMD1-220ENST00000549686 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.57■□□□□ 0.56
LETMD1-220ENST00000549686 NT5C1AQ9BXI3 368 aa18.57■□□□□ 0.56
LETMD1-220ENST00000549686 SDCBP2Q9H190 292 aa18.57■□□□□ 0.56
LETMD1-220ENST00000549686 RC3H2Q9HBD1 1191 aaKnown RBP18.57■□□□□ 0.56
LETMD1-220ENST00000549686 ZKSCAN5Q9Y2L8 839 aa18.57■□□□□ 0.56
LETMD1-220ENST00000549686 FAN1Q9Y2M0 1017 aa18.57■□□□□ 0.56
LETMD1-220ENST00000549686 EPN1Q9Y6I3 576 aaPredicted RBP18.57■□□□□ 0.56
LETMD1-220ENST00000549686 TRIP11Q15643 1979 aa18.57■□□□□ 0.56
LETMD1-220ENST00000549686 SOWAHDA6NJG2 315 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 EIF3CLB5ME19 914 aaKnown RBP18.56■□□□□ 0.56
LETMD1-220ENST00000549686 AKR1B10O60218 316 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 GJB5O95377 273 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 CYP11A1P05108 521 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 TYMPP19971 482 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 EIF4A3P38919 411 aaKnown RBP18.56■□□□□ 0.56
LETMD1-220ENST00000549686 LHX1P48742 406 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 EPHB4P54760 987 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 CDH8P55286 799 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 BMS1Q14692 1282 aaKnown RBP18.56■□□□□ 0.56
LETMD1-220ENST00000549686 METTL23Q86XA0 190 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 ADGRF2Q8IZF7 708 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 C3orf58Q8NDZ4 430 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 EPS8L1Q8TE68 723 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 YME1L1Q96TA2 773 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 EIF3CQ99613 913 aaKnown RBP18.56■□□□□ 0.56
LETMD1-220ENST00000549686 AGPAT1Q99943 283 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 PAAF1Q9BRP4 392 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 SNX25Q9H3E2 840 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 LUC7LQ9NQ29 371 aaKnown RBP18.56■□□□□ 0.56
LETMD1-220ENST00000549686 PCDHB8Q9UN66 801 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 L1RE1Q9UN81 338 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 SLC4A7Q9Y6M7 1214 aa18.56■□□□□ 0.56
LETMD1-220ENST00000549686 NRP1O14786 923 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 CCP110O43303 1012 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 TADA2AO75478 443 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 KIF4AO95239 1232 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 NDUFA10O95299 355 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 GALTP07902 379 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 LAG3P18627 525 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 GNA15P30679 374 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 RAP1GAPP47736 663 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 ALDH7A1P49419 539 aaKnown RBP18.55■□□□□ 0.56
LETMD1-220ENST00000549686 KIF11P52732 1056 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 KRT83P78385 493 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 HTRA4P83105 476 aaPredicted RBP18.55■□□□□ 0.56
LETMD1-220ENST00000549686 CDR2Q01850 454 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 BTG3Q14201 252 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms