RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 USP33Q8TEY7 942 aa11.68□□□□□ -0.54
TROAP-210ENST00000549534 LPIN3Q9BQK8 851 aa11.68□□□□□ -0.54
TROAP-210ENST00000549534 IFT122Q9HBG6 1241 aa11.68□□□□□ -0.54
TROAP-210ENST00000549534 HPS4Q9NQG7 708 aa11.68□□□□□ -0.54
TROAP-210ENST00000549534 GKN1Q9NS71 199 aa11.68□□□□□ -0.54
TROAP-210ENST00000549534 DIAPH3Q9NSV4 1193 aa11.68□□□□□ -0.54
TROAP-210ENST00000549534 CEP72Q9P209 647 aa11.68□□□□□ -0.54
TROAP-210ENST00000549534 SUCLA2Q9P2R7 463 aaPredicted RBP11.68□□□□□ -0.54
TROAP-210ENST00000549534 ITPR2Q14571 2701 aa11.67□□□□□ -0.54
TROAP-210ENST00000549534 IGKV6-21A0A0C4DH24 114 aa11.67□□□□□ -0.54
TROAP-210ENST00000549534 A0A1B0GTL3 188 aa11.67□□□□□ -0.54
TROAP-210ENST00000549534 A0A1W2PRU2 124 aa11.67□□□□□ -0.54
TROAP-210ENST00000549534 DHX15O43143 795 aaKnown RBP11.67□□□□□ -0.54
TROAP-210ENST00000549534 BRINP1O60477 761 aa11.67□□□□□ -0.54
TROAP-210ENST00000549534 SMARCA1P28370 1054 aa11.67□□□□□ -0.54
TROAP-210ENST00000549534 AXLP30530 894 aa11.67□□□□□ -0.54
TROAP-210ENST00000549534 PCBP4P57723 403 aaKnown RBP11.67□□□□□ -0.54
TROAP-210ENST00000549534 PCBP1Q15365 356 aaKnown RBP eCLIP11.67□□□□□ -0.54
TROAP-210ENST00000549534 TARBP2Q15633 366 aaKnown RBP11.67□□□□□ -0.54
TROAP-210ENST00000549534 IL27RAQ6UWB1 636 aa11.67□□□□□ -0.54
TROAP-210ENST00000549534 TICAM1Q8IUC6 712 aa11.67□□□□□ -0.54
TROAP-210ENST00000549534 FRMD1Q8N878 549 aa11.67□□□□□ -0.54
TROAP-210ENST00000549534 EZH1Q92800 747 aaPredicted RBP11.67□□□□□ -0.54
TROAP-210ENST00000549534 CD101Q93033 1021 aa11.67□□□□□ -0.54
TROAP-210ENST00000549534 NLRP4Q96MN2 994 aa11.67□□□□□ -0.54
TROAP-210ENST00000549534 PAAF1Q9BRP4 392 aa11.67□□□□□ -0.54
TROAP-210ENST00000549534 CSRNP2Q9H175 543 aa11.67□□□□□ -0.54
TROAP-210ENST00000549534 PLEKHB1Q9UF11 243 aaPredicted RBP11.67□□□□□ -0.54
TROAP-210ENST00000549534 OTOL1A6NHN0 477 aaPredicted RBP11.66□□□□□ -0.54
TROAP-210ENST00000549534 FGF19O95750 216 aa11.66□□□□□ -0.54
TROAP-210ENST00000549534 SFTPCP11686 197 aa11.66□□□□□ -0.54
TROAP-210ENST00000549534 SDSP20132 328 aa11.66□□□□□ -0.54
TROAP-210ENST00000549534 TNFRSF8P28908 595 aa11.66□□□□□ -0.54
TROAP-210ENST00000549534 TLE1Q04724 770 aa11.66□□□□□ -0.54
TROAP-210ENST00000549534 TWF1Q12792 350 aa11.66□□□□□ -0.54
TROAP-210ENST00000549534 MYO1EQ12965 1108 aa11.66□□□□□ -0.54
TROAP-210ENST00000549534 TTC30AQ86WT1 665 aa11.66□□□□□ -0.54
TROAP-210ENST00000549534 PI4K2BQ8TCG2 481 aa11.66□□□□□ -0.54
TROAP-210ENST00000549534 TSC1Q92574 1164 aa11.66□□□□□ -0.54
TROAP-210ENST00000549534 UBAC1Q9BSL1 405 aa11.66□□□□□ -0.54
TROAP-210ENST00000549534 ZNF768Q9H5H4 540 aaKnown RBP11.66□□□□□ -0.54
TROAP-210ENST00000549534 TBC1D22BQ9NU19 505 aa11.66□□□□□ -0.54
TROAP-210ENST00000549534 ZSWIM5Q9P217 1185 aa11.66□□□□□ -0.54
TROAP-210ENST00000549534 BCCIPQ9P287 314 aaKnown RBP eCLIP11.66□□□□□ -0.54
TROAP-210ENST00000549534 TCEAL9Q9UHQ7 104 aa11.66□□□□□ -0.54
TROAP-210ENST00000549534 SETD2Q9BYW2 2564 aaPredicted RBP11.65□□□□□ -0.54
TROAP-210ENST00000549534 ESYT2A0FGR8 921 aa11.65□□□□□ -0.54
TROAP-210ENST00000549534 TMEM189-UBE2V1I3L0A0 370 aa11.65□□□□□ -0.54
TROAP-210ENST00000549534 SEC24AO95486 1093 aa11.65□□□□□ -0.54
TROAP-210ENST00000549534 NDUFV2P19404 249 aa11.65□□□□□ -0.54
TROAP-210ENST00000549534 GJA4P35212 333 aa11.65□□□□□ -0.54
TROAP-210ENST00000549534 NCBP1Q09161 790 aaKnown RBP11.65□□□□□ -0.54
TROAP-210ENST00000549534 TARDBPQ13148 414 aaKnown RBP eCLIP11.65□□□□□ -0.54
TROAP-210ENST00000549534 HSF5Q4G112 596 aaPredicted RBP11.65□□□□□ -0.54
TROAP-210ENST00000549534 ARHGAP15Q53QZ3 475 aa11.65□□□□□ -0.54
TROAP-210ENST00000549534 SYCP2LQ5T4T6 812 aa11.65□□□□□ -0.54
TROAP-210ENST00000549534 HIST2H2BCQ6DN03 193 aa11.65□□□□□ -0.54
TROAP-210ENST00000549534 TEX2Q8IWB9 1127 aa11.65□□□□□ -0.54
TROAP-210ENST00000549534 SLC7A3Q8WY07 619 aa11.65□□□□□ -0.54
TROAP-210ENST00000549534 ZNF578Q96N58 590 aaPredicted RBP11.65□□□□□ -0.54
TROAP-210ENST00000549534 JPH2Q9BR39 696 aaPredicted RBP11.65□□□□□ -0.54
TROAP-210ENST00000549534 EIF2AQ9BY44 585 aaKnown RBP11.65□□□□□ -0.54
TROAP-210ENST00000549534 LRRC3Q9BY71 257 aa11.65□□□□□ -0.54
TROAP-210ENST00000549534 DPH1Q9BZG8 443 aa11.65□□□□□ -0.54
TROAP-210ENST00000549534 EBF3Q9H4W6 596 aa11.65□□□□□ -0.54
TROAP-210ENST00000549534 GAREM1Q9H706 876 aa11.65□□□□□ -0.54
TROAP-210ENST00000549534 HELLSQ9NRZ9 838 aa11.65□□□□□ -0.54
TROAP-210ENST00000549534 HES2Q9Y543 173 aa11.65□□□□□ -0.54
TROAP-210ENST00000549534 CASTOR2A6NHX0 329 aa11.64□□□□□ -0.55
TROAP-210ENST00000549534 TRAPPC3O43617 180 aa11.64□□□□□ -0.55
TROAP-210ENST00000549534 CILPO75339 1184 aa11.64□□□□□ -0.55
TROAP-210ENST00000549534 C1SP09871 688 aa11.64□□□□□ -0.55
TROAP-210ENST00000549534 MATKP42679 507 aa11.64□□□□□ -0.55
TROAP-210ENST00000549534 MRPS21P82921 87 aaKnown RBP11.64□□□□□ -0.55
TROAP-210ENST00000549534 PLD1Q13393 1074 aa11.64□□□□□ -0.55
TROAP-210ENST00000549534 PDGFRLQ15198 375 aa11.64□□□□□ -0.55
TROAP-210ENST00000549534 NOTUMQ6P988 496 aa11.64□□□□□ -0.55
TROAP-210ENST00000549534 GPIHBP1Q8IV16 184 aa11.64□□□□□ -0.55
TROAP-210ENST00000549534 DHX40Q8IX18 779 aaKnown RBP11.64□□□□□ -0.55
TROAP-210ENST00000549534 CACTIN-AS1Q8N1I8 211 aa11.64□□□□□ -0.55
TROAP-210ENST00000549534 EXD3Q8N9H8 876 aa11.64□□□□□ -0.55
TROAP-210ENST00000549534 RRP36Q96EU6 259 aaKnown RBP11.64□□□□□ -0.55
TROAP-210ENST00000549534 DDX27Q96GQ7 796 aaKnown RBP11.64□□□□□ -0.55
TROAP-210ENST00000549534 HIC2Q96JB3 615 aa11.64□□□□□ -0.55
TROAP-210ENST00000549534 TRIM6Q9C030 488 aaPredicted RBP11.64□□□□□ -0.55
TROAP-210ENST00000549534 ZMYM5Q9UJ78 669 aa11.64□□□□□ -0.55
TROAP-210ENST00000549534 SPTBN1Q01082 2364 aaKnown RBP11.63□□□□□ -0.55
TROAP-210ENST00000549534 TDRD15B5MCY1 1934 aaKnown RBP11.63□□□□□ -0.55
TROAP-210ENST00000549534 K7ENP7 123 aa11.63□□□□□ -0.55
TROAP-210ENST00000549534 ZNF213O14771 459 aa11.63□□□□□ -0.55
TROAP-210ENST00000549534 GRK6P43250 576 aa11.63□□□□□ -0.55
TROAP-210ENST00000549534 AFMP43652 599 aa11.63□□□□□ -0.55
TROAP-210ENST00000549534 INHBCP55103 352 aa11.63□□□□□ -0.55
TROAP-210ENST00000549534 PRKCEQ02156 737 aa11.63□□□□□ -0.55
TROAP-210ENST00000549534 CYP4A11Q02928 519 aa11.63□□□□□ -0.55
TROAP-210ENST00000549534 PTH1RQ03431 593 aa11.63□□□□□ -0.55
TROAP-210ENST00000549534 SART3Q15020 963 aaKnown RBP11.63□□□□□ -0.55
TROAP-210ENST00000549534 CCDC157Q569K6 752 aa11.63□□□□□ -0.55
TROAP-210ENST00000549534 WDR45BQ5MNZ6 344 aa11.63□□□□□ -0.55
TROAP-210ENST00000549534 STXBP5Q5T5C0 1151 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms