RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 MICALCLQ6ZW33 695 aa5.38□□□□□ -1.55
CCDC38-206ENST00000548771 PDSS2Q86YH6 399 aa5.38□□□□□ -1.55
CCDC38-206ENST00000548771 SRRM1Q8IYB3 904 aaKnown RBP5.38□□□□□ -1.55
CCDC38-206ENST00000548771 ADGRG5Q8IZF4 528 aa5.38□□□□□ -1.55
CCDC38-206ENST00000548771 SH2D3CQ8N5H7 860 aa5.38□□□□□ -1.55
CCDC38-206ENST00000548771 PDPRQ8NCN5 879 aa5.38□□□□□ -1.55
CCDC38-206ENST00000548771 KAT5Q92993 513 aa5.38□□□□□ -1.55
CCDC38-206ENST00000548771 TMEM125Q96AQ2 219 aa5.38□□□□□ -1.55
CCDC38-206ENST00000548771 SLC13A1Q9BZW2 595 aa5.38□□□□□ -1.55
CCDC38-206ENST00000548771 SIDT1Q9NXL6 827 aaKnown RBP5.38□□□□□ -1.55
CCDC38-206ENST00000548771 CDYLQ9Y232 598 aa5.38□□□□□ -1.55
CCDC38-206ENST00000548771 CCDC195A0A1B0GUA6 201 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 CCDC151A5D8V7 595 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 VWC2LB2RUY7 222 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 F2RL2O00254 374 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 ZRANB2O95218 330 aaKnown RBP eCLIP5.37□□□□□ -1.55
CCDC38-206ENST00000548771 MYBL2P10244 700 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 MALP21145 153 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 GRIA3P42263 894 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 MC2RQ01718 297 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 ACAP2Q15057 778 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 KAZNQ674X7 775 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 PPP4R3AQ6IN85 833 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 TSHZ1Q6ZSZ6 1077 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 PEG10Q86TG7 708 aaKnown RBP5.37□□□□□ -1.55
CCDC38-206ENST00000548771 NSUN7Q8NE18 718 aaKnown RBP5.37□□□□□ -1.55
CCDC38-206ENST00000548771 PGBD1Q96JS3 809 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 HEPHQ9BQS7 1158 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 PACSIN1Q9BY11 444 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 IL17RBQ9NRM6 502 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 ASB6Q9NWX5 421 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.37□□□□□ -1.55
CCDC38-206ENST00000548771 CFAP20Q9Y6A4 193 aaKnown RBP5.37□□□□□ -1.55
CCDC38-206ENST00000548771 TNKSO95271 1327 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 SPATA31A3Q5VYP0 1347 aa5.37□□□□□ -1.55
CCDC38-206ENST00000548771 ADM5C9JUS6 153 aa5.36□□□□□ -1.55
CCDC38-206ENST00000548771 PPP3CBP16298 524 aa5.36□□□□□ -1.55
CCDC38-206ENST00000548771 KIF23Q02241 960 aaPredicted RBP5.36□□□□□ -1.55
CCDC38-206ENST00000548771 TCF15Q12870 199 aa5.36□□□□□ -1.55
CCDC38-206ENST00000548771 TXNRD1Q16881 649 aa5.36□□□□□ -1.55
CCDC38-206ENST00000548771 SLC17A8Q8NDX2 589 aa5.36□□□□□ -1.55
CCDC38-206ENST00000548771 MYCBPAPQ8TBZ2 947 aa5.36□□□□□ -1.55
CCDC38-206ENST00000548771 TFAP2BQ92481 460 aa5.36□□□□□ -1.55
CCDC38-206ENST00000548771 SCAMP4Q969E2 229 aa5.36□□□□□ -1.55
CCDC38-206ENST00000548771 ETAA1Q9NY74 926 aa5.36□□□□□ -1.55
CCDC38-206ENST00000548771 WASHC2CQ9Y4E1 1318 aa5.36□□□□□ -1.55
CCDC38-206ENST00000548771 XPOTO43592 962 aaKnown RBP5.35□□□□□ -1.55
CCDC38-206ENST00000548771 CYP2C19P33261 490 aa5.35□□□□□ -1.55
CCDC38-206ENST00000548771 SOX10P56693 466 aa5.35□□□□□ -1.55
CCDC38-206ENST00000548771 ITKQ08881 620 aa5.35□□□□□ -1.55
CCDC38-206ENST00000548771 KHDC1Q4VXA5 237 aaKnown RBP5.35□□□□□ -1.55
CCDC38-206ENST00000548771 ZNF788Q6ZQV5 615 aa5.35□□□□□ -1.55
CCDC38-206ENST00000548771 GRASPQ7Z6J2 395 aaPredicted RBP5.35□□□□□ -1.55
CCDC38-206ENST00000548771 TTC7BQ86TV6 843 aa5.35□□□□□ -1.55
CCDC38-206ENST00000548771 PRR18Q8N4B5 295 aa5.35□□□□□ -1.55
CCDC38-206ENST00000548771 PRPF38AQ8NAV1 312 aaKnown RBP5.35□□□□□ -1.55
CCDC38-206ENST00000548771 SARAFQ96BY9 339 aa5.35□□□□□ -1.55
CCDC38-206ENST00000548771 FBXL20Q96IG2 436 aa5.35□□□□□ -1.55
CCDC38-206ENST00000548771 VRK1Q99986 396 aaPredicted RBP5.35□□□□□ -1.55
CCDC38-206ENST00000548771 IMPG2Q9BZV3 1241 aa5.35□□□□□ -1.55
CCDC38-206ENST00000548771 GPR35Q9HC97 309 aa5.35□□□□□ -1.55
CCDC38-206ENST00000548771 AOX1Q06278 1338 aa5.34□□□□□ -1.55
CCDC38-206ENST00000548771 KATNA1O75449 491 aa5.34□□□□□ -1.55
CCDC38-206ENST00000548771 ITGB6P18564 788 aa5.34□□□□□ -1.55
CCDC38-206ENST00000548771 TOB1P50616 345 aaPredicted RBP5.34□□□□□ -1.55
CCDC38-206ENST00000548771 PIGFQ07326 219 aa5.34□□□□□ -1.55
CCDC38-206ENST00000548771 CCDC93Q567U6 631 aa5.34□□□□□ -1.55
CCDC38-206ENST00000548771 GADL1Q6ZQY3 521 aa5.34□□□□□ -1.55
CCDC38-206ENST00000548771 FAM90A1Q86YD7 464 aa5.34□□□□□ -1.55
CCDC38-206ENST00000548771 SNX19Q92543 992 aa5.34□□□□□ -1.55
CCDC38-206ENST00000548771 TRIB1Q96RU8 372 aa5.34□□□□□ -1.55
CCDC38-206ENST00000548771 KLC4Q9NSK0 619 aa5.34□□□□□ -1.55
CCDC38-206ENST00000548771 RLIMQ9NVW2 624 aa5.34□□□□□ -1.55
CCDC38-206ENST00000548771 ADAM21Q9UKJ8 722 aa5.34□□□□□ -1.55
CCDC38-206ENST00000548771 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.34□□□□□ -1.55
CCDC38-206ENST00000548771 ADGRA2Q96PE1 1338 aa5.33□□□□□ -1.56
CCDC38-206ENST00000548771 NXPH1P58417 271 aa5.33□□□□□ -1.56
CCDC38-206ENST00000548771 HABP2Q14520 560 aaPredicted RBP5.33□□□□□ -1.56
CCDC38-206ENST00000548771 EPHA10Q5JZY3 1008 aa5.33□□□□□ -1.56
CCDC38-206ENST00000548771 TAPT1Q6NXT6 567 aa5.33□□□□□ -1.56
CCDC38-206ENST00000548771 FAM9AQ8IZU1 332 aaPredicted RBP5.33□□□□□ -1.56
CCDC38-206ENST00000548771 FAM109AQ8N4B1 249 aa5.33□□□□□ -1.56
CCDC38-206ENST00000548771 RFKQ969G6 155 aa5.33□□□□□ -1.56
CCDC38-206ENST00000548771 OSBPL9Q96SU4 736 aa5.33□□□□□ -1.56
CCDC38-206ENST00000548771 AMBRA1Q9C0C7 1298 aa5.33□□□□□ -1.56
CCDC38-206ENST00000548771 KMT5AQ9NQR1 393 aa5.33□□□□□ -1.56
CCDC38-206ENST00000548771 MRPS18AQ9NVS2 196 aaKnown RBP5.33□□□□□ -1.56
CCDC38-206ENST00000548771 MRFAP1Q9Y605 127 aa5.33□□□□□ -1.56
CCDC38-206ENST00000548771 ALG1L2C9J202 215 aa5.32□□□□□ -1.56
CCDC38-206ENST00000548771 IGSF3O75054 1194 aa5.32□□□□□ -1.56
CCDC38-206ENST00000548771 RPLP2P05387 115 aaKnown RBP5.32□□□□□ -1.56
CCDC38-206ENST00000548771 CDK4P11802 303 aa5.32□□□□□ -1.56
CCDC38-206ENST00000548771 PRDX5P30044 214 aa5.32□□□□□ -1.56
CCDC38-206ENST00000548771 NPTX2P47972 431 aa5.32□□□□□ -1.56
CCDC38-206ENST00000548771 ITIH3Q06033 890 aa5.32□□□□□ -1.56
CCDC38-206ENST00000548771 KIF22Q14807 665 aa5.32□□□□□ -1.56
CCDC38-206ENST00000548771 RNF187Q5TA31 235 aaPredicted RBP5.32□□□□□ -1.56
CCDC38-206ENST00000548771 EFCAB2Q5VUJ9 269 aa5.32□□□□□ -1.56
CCDC38-206ENST00000548771 SLC4A10Q6U841 1118 aa5.32□□□□□ -1.56
CCDC38-206ENST00000548771 TOR1AIP2Q8NFQ8 470 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms