RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 WASF2Q9Y6W5 498 aa5.4□□□□□ -1.54
APP-217ENST00000548570 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.39□□□□□ -1.55
APP-217ENST00000548570 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.39□□□□□ -1.55
APP-217ENST00000548570 SMTNL1A8MU46 457 aa5.39□□□□□ -1.55
APP-217ENST00000548570 LGALS16A8MUM7 142 aa5.39□□□□□ -1.55
APP-217ENST00000548570 TMEM189-UBE2V1I3L0A0 370 aa5.39□□□□□ -1.55
APP-217ENST00000548570 PODXLO00592 558 aa5.39□□□□□ -1.55
APP-217ENST00000548570 HOXA2O43364 376 aa5.39□□□□□ -1.55
APP-217ENST00000548570 TBC1D4O60343 1298 aa5.39□□□□□ -1.55
APP-217ENST00000548570 LPXNO60711 386 aa5.39□□□□□ -1.55
APP-217ENST00000548570 LILRB3O75022 631 aa5.39□□□□□ -1.55
APP-217ENST00000548570 ZMYND10O75800 440 aa5.39□□□□□ -1.55
APP-217ENST00000548570 STAU1O95793 577 aaKnown RBP5.39□□□□□ -1.55
APP-217ENST00000548570 ASS1P00966 412 aaKnown RBP5.39□□□□□ -1.55
APP-217ENST00000548570 HLA-DRAP01903 254 aa5.39□□□□□ -1.55
APP-217ENST00000548570 AFPP02771 609 aaKnown RBP5.39□□□□□ -1.55
APP-217ENST00000548570 ITGB3P05106 788 aa5.39□□□□□ -1.55
APP-217ENST00000548570 TNNI1P19237 187 aa5.39□□□□□ -1.55
APP-217ENST00000548570 ACO1P21399 889 aaKnown RBP5.39□□□□□ -1.55
APP-217ENST00000548570 PON1P27169 355 aa5.39□□□□□ -1.55
APP-217ENST00000548570 GTF2H1P32780 548 aa5.39□□□□□ -1.55
APP-217ENST00000548570 BMPR1AP36894 532 aa5.39□□□□□ -1.55
APP-217ENST00000548570 ASPAP45381 313 aa5.39□□□□□ -1.55
APP-217ENST00000548570 MXI1P50539 228 aa5.39□□□□□ -1.55
APP-217ENST00000548570 CDH8P55286 799 aa5.39□□□□□ -1.55
APP-217ENST00000548570 LILRA4P59901 499 aa5.39□□□□□ -1.55
APP-217ENST00000548570 NCOA4Q13772 614 aa5.39□□□□□ -1.55
APP-217ENST00000548570 BTG3Q14201 252 aaPredicted RBP5.39□□□□□ -1.55
APP-217ENST00000548570 HSP90AA2PQ14568 343 aaPredicted RBP5.39□□□□□ -1.55
APP-217ENST00000548570 SURF1Q15526 300 aa5.39□□□□□ -1.55
APP-217ENST00000548570 MAN2A1Q16706 1144 aa5.39□□□□□ -1.55
APP-217ENST00000548570 DUOXA2Q1HG44 320 aa5.39□□□□□ -1.55
APP-217ENST00000548570 LRIT3Q3SXY7 679 aa5.39□□□□□ -1.55
APP-217ENST00000548570 TIGD5Q53EQ6 642 aa5.39□□□□□ -1.55
APP-217ENST00000548570 DCAF17Q5H9S7 520 aaPredicted RBP5.39□□□□□ -1.55
APP-217ENST00000548570 KIAA0319Q5VV43 1072 aa5.39□□□□□ -1.55
APP-217ENST00000548570 KRT39Q6A163 491 aa5.39□□□□□ -1.55
APP-217ENST00000548570 TRIM65Q6PJ69 517 aa5.39□□□□□ -1.55
APP-217ENST00000548570 SARM1Q6SZW1 724 aa5.39□□□□□ -1.55
APP-217ENST00000548570 KCNT2Q6UVM3 1135 aa5.39□□□□□ -1.55
APP-217ENST00000548570 RSPO2Q6UXX9 243 aaPredicted RBP5.39□□□□□ -1.55
APP-217ENST00000548570 APBB1IPQ7Z5R6 666 aaPredicted RBP5.39□□□□□ -1.55
APP-217ENST00000548570 NT5DC4Q86YG4 428 aa5.39□□□□□ -1.55
APP-217ENST00000548570 ARHGEF19Q8IW93 802 aa5.39□□□□□ -1.55
APP-217ENST00000548570 LRRC43Q8N309 656 aa5.39□□□□□ -1.55
APP-217ENST00000548570 COLGALT1Q8NBJ5 622 aa5.39□□□□□ -1.55
APP-217ENST00000548570 EHBP1Q8NDI1 1231 aa5.39□□□□□ -1.55
APP-217ENST00000548570 OLIG1Q8TAK6 271 aa5.39□□□□□ -1.55
APP-217ENST00000548570 WHAMMQ8TF30 809 aa5.39□□□□□ -1.55
APP-217ENST00000548570 HASPINQ8TF76 798 aa5.39□□□□□ -1.55
APP-217ENST00000548570 KBTBD7Q8WVZ9 684 aa5.39□□□□□ -1.55
APP-217ENST00000548570 IGSF21Q96ID5 467 aa5.39□□□□□ -1.55
APP-217ENST00000548570 KREMEN1Q96MU8 473 aa5.39□□□□□ -1.55
APP-217ENST00000548570 TWNKQ96RR1 684 aa5.39□□□□□ -1.55
APP-217ENST00000548570 FNBP1Q96RU3 617 aa5.39□□□□□ -1.55
APP-217ENST00000548570 TSPAN18Q96SJ8 248 aa5.39□□□□□ -1.55
APP-217ENST00000548570 YME1L1Q96TA2 773 aa5.39□□□□□ -1.55
APP-217ENST00000548570 RTP3Q9BQQ7 232 aa5.39□□□□□ -1.55
APP-217ENST00000548570 ZSWIM1Q9BR11 485 aa5.39□□□□□ -1.55
APP-217ENST00000548570 MRPL45Q9BRJ2 306 aaKnown RBP5.39□□□□□ -1.55
APP-217ENST00000548570 TMEM175Q9BSA9 504 aa5.39□□□□□ -1.55
APP-217ENST00000548570 CRACR2AQ9BSW2 395 aa5.39□□□□□ -1.55
APP-217ENST00000548570 NAA15Q9BXJ9 866 aaKnown RBP5.39□□□□□ -1.55
APP-217ENST00000548570 XPO4Q9C0E2 1151 aaKnown RBP5.39□□□□□ -1.55
APP-217ENST00000548570 GPR88Q9GZN0 384 aa5.39□□□□□ -1.55
APP-217ENST00000548570 GANQ9H2C0 597 aa5.39□□□□□ -1.55
APP-217ENST00000548570 NKX2-4Q9H2Z4 354 aa5.39□□□□□ -1.55
APP-217ENST00000548570 TTYH1Q9H313 450 aaPredicted RBP5.39□□□□□ -1.55
APP-217ENST00000548570 MMRN2Q9H8L6 949 aa5.39□□□□□ -1.55
APP-217ENST00000548570 VRTNQ9H8Y1 702 aa5.39□□□□□ -1.55
APP-217ENST00000548570 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.39□□□□□ -1.55
APP-217ENST00000548570 CHST7Q9NS84 486 aa5.39□□□□□ -1.55
APP-217ENST00000548570 RAB20Q9NX57 234 aa5.39□□□□□ -1.55
APP-217ENST00000548570 IFNKQ9P0W0 207 aa5.39□□□□□ -1.55
APP-217ENST00000548570 KANSL3Q9P2N6 904 aa5.39□□□□□ -1.55
APP-217ENST00000548570 HMGXB4Q9UGU5 601 aa5.39□□□□□ -1.55
APP-217ENST00000548570 AGAP1Q9UPQ3 857 aa5.39□□□□□ -1.55
APP-217ENST00000548570 INSL6Q9Y581 213 aa5.39□□□□□ -1.55
APP-217ENST00000548570 NUB1Q9Y5A7 615 aa5.39□□□□□ -1.55
APP-217ENST00000548570 PCDHGC5Q9Y5F6 944 aa5.39□□□□□ -1.55
APP-217ENST00000548570 PCDHA11Q9Y5I1 949 aa5.39□□□□□ -1.55
APP-217ENST00000548570 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.39□□□□□ -1.55
APP-217ENST00000548570 SCN5AQ14524 2016 aa5.39□□□□□ -1.55
APP-217ENST00000548570 WDR81Q562E7 1941 aa5.38□□□□□ -1.55
APP-217ENST00000548570 TRIP12Q14669 1992 aaPredicted RBP5.38□□□□□ -1.55
APP-217ENST00000548570 GTPBP10A4D1E9 387 aaKnown RBP5.38□□□□□ -1.55
APP-217ENST00000548570 BECN2A8MW95 431 aa5.38□□□□□ -1.55
APP-217ENST00000548570 C5orf67F2Z3F1 127 aa5.38□□□□□ -1.55
APP-217ENST00000548570 M0QZQ0 153 aa5.38□□□□□ -1.55
APP-217ENST00000548570 RFXAPO00287 272 aa5.38□□□□□ -1.55
APP-217ENST00000548570 GABRDO14764 452 aa5.38□□□□□ -1.55
APP-217ENST00000548570 GRM6O15303 877 aa5.38□□□□□ -1.55
APP-217ENST00000548570 CAPN5O15484 640 aaPredicted RBP5.38□□□□□ -1.55
APP-217ENST00000548570 ADAM12O43184 909 aa5.38□□□□□ -1.55
APP-217ENST00000548570 ZC3H11AO75152 810 aaKnown RBP eCLIP5.38□□□□□ -1.55
APP-217ENST00000548570 DXOO77932 396 aaKnown RBP5.38□□□□□ -1.55
APP-217ENST00000548570 VNN2O95498 520 aa5.38□□□□□ -1.55
APP-217ENST00000548570 FGFR1OPO95684 399 aaKnown RBP5.38□□□□□ -1.55
APP-217ENST00000548570 CALCAP01258 141 aa5.38□□□□□ -1.55
APP-217ENST00000548570 TMEM191BP0C7N4 346 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms