RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 ZPBP2Q6X784 338 aa17.92■□□□□ 0.46
SSH1-208ENST00000548522 MAMSTRQ6ZN01 415 aa17.92■□□□□ 0.46
SSH1-208ENST00000548522 ATAD1Q8NBU5 361 aa17.92■□□□□ 0.46
SSH1-208ENST00000548522 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.92■□□□□ 0.46
SSH1-208ENST00000548522 LACTBL1A8MY62 500 aa17.91■□□□□ 0.46
SSH1-208ENST00000548522 K7ESF4 209 aa17.91■□□□□ 0.46
SSH1-208ENST00000548522 HRO43593 1189 aa17.91■□□□□ 0.46
SSH1-208ENST00000548522 FAM189A1O60320 539 aa17.91■□□□□ 0.46
SSH1-208ENST00000548522 PRAMEF12O95522 483 aa17.91■□□□□ 0.46
SSH1-208ENST00000548522 MATR3P43243 847 aaKnown RBP eCLIP17.91■□□□□ 0.46
SSH1-208ENST00000548522 CXCL12P48061 93 aa17.91■□□□□ 0.46
SSH1-208ENST00000548522 NRLP54845 237 aa17.91■□□□□ 0.46
SSH1-208ENST00000548522 SLC12A3P55017 1021 aa17.91■□□□□ 0.46
SSH1-208ENST00000548522 FCHO2Q0JRZ9 810 aa17.91■□□□□ 0.46
SSH1-208ENST00000548522 ENOX2Q16206 610 aaKnown RBP17.91■□□□□ 0.46
SSH1-208ENST00000548522 HEATR6Q6AI08 1181 aaKnown RBP17.91■□□□□ 0.46
SSH1-208ENST00000548522 LAIR1Q6GTX8 287 aa17.91■□□□□ 0.46
SSH1-208ENST00000548522 DTHD1Q6ZMT9 781 aa17.91■□□□□ 0.46
SSH1-208ENST00000548522 GAREM2Q75VX8 874 aa17.91■□□□□ 0.46
SSH1-208ENST00000548522 ARID3BQ8IVW6 561 aaPredicted RBP17.91■□□□□ 0.46
SSH1-208ENST00000548522 IER2Q9BTL4 223 aa17.91■□□□□ 0.46
SSH1-208ENST00000548522 GTSE1Q9NYZ3 720 aa17.91■□□□□ 0.46
SSH1-208ENST00000548522 RAB23Q9ULC3 237 aa17.91■□□□□ 0.46
SSH1-208ENST00000548522 MAFFQ9ULX9 164 aa17.91■□□□□ 0.46
SSH1-208ENST00000548522 STK24Q9Y6E0 443 aa17.91■□□□□ 0.46
SSH1-208ENST00000548522 MTMR11A4FU01 709 aa17.9■□□□□ 0.46
SSH1-208ENST00000548522 CLTAP09496 248 aa17.9■□□□□ 0.46
SSH1-208ENST00000548522 SDHBP21912 280 aa17.9■□□□□ 0.46
SSH1-208ENST00000548522 PRPHP41219 470 aa17.9■□□□□ 0.46
SSH1-208ENST00000548522 KPNA1P52294 538 aaPredicted RBP17.9■□□□□ 0.46
SSH1-208ENST00000548522 GPR17Q13304 367 aa17.9■□□□□ 0.46
SSH1-208ENST00000548522 SIM2Q14190 667 aaPredicted RBP17.9■□□□□ 0.46
SSH1-208ENST00000548522 CENPPQ6IPU0 288 aa17.9■□□□□ 0.46
SSH1-208ENST00000548522 YAF2Q8IY57 180 aa17.9■□□□□ 0.46
SSH1-208ENST00000548522 CELF5Q8N6W0 485 aaKnown RBP17.9■□□□□ 0.46
SSH1-208ENST00000548522 SYT2Q8N9I0 419 aaPredicted RBP17.9■□□□□ 0.46
SSH1-208ENST00000548522 OR10T2Q8NGX3 314 aa17.9■□□□□ 0.46
SSH1-208ENST00000548522 CSGALNACT1Q8TDX6 532 aa17.9■□□□□ 0.46
SSH1-208ENST00000548522 LRRC15Q8TF66 581 aa17.9■□□□□ 0.46
SSH1-208ENST00000548522 BICD1Q96G01 975 aa17.9■□□□□ 0.46
SSH1-208ENST00000548522 KIF2CQ99661 725 aa17.9■□□□□ 0.46
SSH1-208ENST00000548522 RTKNQ9BST9 563 aa17.9■□□□□ 0.46
SSH1-208ENST00000548522 TIPINQ9BVW5 301 aa17.9■□□□□ 0.46
SSH1-208ENST00000548522 UBQLN1Q9UMX0 589 aaKnown RBP17.9■□□□□ 0.46
SSH1-208ENST00000548522 CFAP47Q6ZTR5 3102 aa17.89■□□□□ 0.46
SSH1-208ENST00000548522 MAP1BP46821 2468 aaKnown RBP17.89■□□□□ 0.45
SSH1-208ENST00000548522 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.89■□□□□ 0.45
SSH1-208ENST00000548522 SPECC1L-ADORA2AF8WAN1 911 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 LAD1O00515 517 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 CHADO15335 359 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 GDF9O60383 454 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 RETP07949 1114 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 PLA2G4BP0C869 781 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 CTHP32929 405 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 SMTNP53814 917 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 EPHB3P54753 998 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 NCKAP1LP55160 1127 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 PPP2R3AQ06190 1150 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 TNK2Q07912 1038 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 PLD1Q13393 1074 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 PPP2R5DQ14738 602 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 ARSHQ5FYA8 562 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 HYIQ5T013 277 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 OVOS1Q6IE37 1185 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 DSTYKQ6XUX3 929 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 USP37Q86T82 979 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 SPEM1Q8N4L4 309 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 LPIN3Q9BQK8 851 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 ANP32EQ9BTT0 268 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 SMG9Q9H0W8 520 aaKnown RBP17.89■□□□□ 0.45
SSH1-208ENST00000548522 PLEKHA5Q9HAU0 1116 aa17.89■□□□□ 0.45
SSH1-208ENST00000548522 MYBPHLA2RUH7 354 aa17.88■□□□□ 0.45
SSH1-208ENST00000548522 VWA3AA6NCI4 1184 aa17.88■□□□□ 0.45
SSH1-208ENST00000548522 OR6C75A6NL08 312 aa17.88■□□□□ 0.45
SSH1-208ENST00000548522 NFICP08651 508 aa17.88■□□□□ 0.45
SSH1-208ENST00000548522 CYP3A5P20815 502 aa17.88■□□□□ 0.45
SSH1-208ENST00000548522 GABRR2P28476 465 aa17.88■□□□□ 0.45
SSH1-208ENST00000548522 ALDH1A3P47895 512 aa17.88■□□□□ 0.45
SSH1-208ENST00000548522 CYP4F8P98187 520 aa17.88■□□□□ 0.45
SSH1-208ENST00000548522 ATP2C1P98194 919 aaPredicted RBP17.88■□□□□ 0.45
SSH1-208ENST00000548522 LRRC32Q14392 662 aa17.88■□□□□ 0.45
SSH1-208ENST00000548522 TMEM119Q4V9L6 283 aa17.88■□□□□ 0.45
SSH1-208ENST00000548522 DNAJB7Q7Z6W7 309 aaPredicted RBP17.88■□□□□ 0.45
SSH1-208ENST00000548522 PSMG2Q969U7 264 aa17.88■□□□□ 0.45
SSH1-208ENST00000548522 GPR88Q9GZN0 384 aa17.88■□□□□ 0.45
SSH1-208ENST00000548522 ATXN3LQ9H3M9 355 aa17.88■□□□□ 0.45
SSH1-208ENST00000548522 SEMA4GQ9NTN9 838 aa17.88■□□□□ 0.45
SSH1-208ENST00000548522 TSC2P49815 1807 aa17.88■□□□□ 0.45
SSH1-208ENST00000548522 USP24Q9UPU5 2620 aa17.87■□□□□ 0.45
SSH1-208ENST00000548522 HNRNPDLO14979 420 aaKnown RBP17.87■□□□□ 0.45
SSH1-208ENST00000548522 ATF6P18850 670 aa17.87■□□□□ 0.45
SSH1-208ENST00000548522 LIG4P49917 911 aa17.87■□□□□ 0.45
SSH1-208ENST00000548522 LILRA4P59901 499 aa17.87■□□□□ 0.45
SSH1-208ENST00000548522 PON2Q15165 354 aa17.87■□□□□ 0.45
SSH1-208ENST00000548522 GPR158Q5T848 1215 aa17.87■□□□□ 0.45
SSH1-208ENST00000548522 JADE1Q6IE81 842 aa17.87■□□□□ 0.45
SSH1-208ENST00000548522 SLC39A4Q6P5W5 647 aa17.87■□□□□ 0.45
SSH1-208ENST00000548522 PKN3Q6P5Z2 889 aa17.87■□□□□ 0.45
SSH1-208ENST00000548522 PRR23CQ6ZRP0 262 aa17.87■□□□□ 0.45
SSH1-208ENST00000548522 HAUS6Q7Z4H7 955 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms