RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 SMC3Q9UQE7 1217 aa16.53■□□□□ 0.24
SNX29P1-201ENST00000548357 KIF3AQ9Y496 699 aa16.53■□□□□ 0.24
SNX29P1-201ENST00000548357 NCOR2Q9Y618 2525 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 TRAK2O60296 914 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 MICAL2O94851 1124 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 TDGF1P13385 188 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 MARCKSP29966 332 aaPredicted RBP16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 ACOT2P49753 483 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 C9orf57Q5W0N0 161 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 LARP1BQ659C4 914 aaKnown RBP16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 CENPPQ6IPU0 288 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 DSTYKQ6XUX3 929 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 NELL1Q92832 810 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 DNASE1L2Q92874 299 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 EPSTI1Q96J88 318 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 SENP8Q96LD8 212 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 AK8Q96MA6 479 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 TRMT61BQ9BVS5 477 aaKnown RBP16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 SEMA4AQ9H3S1 761 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 ZHX3Q9H4I2 956 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 RPF1Q9H9Y2 349 aaKnown RBP16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 PARVGQ9HBI0 331 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 PRMT8Q9NR22 394 aaPredicted RBP16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 ASAH2Q9NR71 780 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 FBXO4Q9UKT5 387 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 CLIC4Q9Y696 253 aa16.52■□□□□ 0.24
SNX29P1-201ENST00000548357 HEPACAM2A8MVW5 462 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 ZNF197O14709 1029 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 UBA7P41226 1012 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 SOX9P48436 509 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 LILRA4P59901 499 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 GTF2BQ00403 316 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 KCNA1Q09470 495 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 GPR17Q13304 367 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 PTPAQ15257 358 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 CYP4A22Q5TCH4 519 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 OVOS1Q6IE37 1185 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 IQCEQ6IPM2 695 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 FAM173BQ6P4H8 233 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 ZC3H14Q6PJT7 736 aaKnown RBP16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 ZNF852Q6ZMS4 543 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 GAREM2Q75VX8 874 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 EFCAB13Q8IY85 973 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 KCTD17Q8N5Z5 321 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 STKLD1Q8NE28 680 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 CALML4Q96GE6 196 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 LPIN3Q9BQK8 851 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 FGFBP2Q9BYJ0 223 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 SDK1Q7Z5N4 2213 aa16.51■□□□□ 0.23
SNX29P1-201ENST00000548357 MED19A0JLT2 244 aaPredicted RBP16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 ANO9A1A5B4 782 aa16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 PIRO00625 290 aa16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 KINO60870 393 aaKnown RBP16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 LILRB5O75023 590 aa16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 PSMC3P17980 439 aa16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 ATF6P18850 670 aa16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 RPS9P46781 194 aaKnown RBP16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 GAS6Q14393 721 aa16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 ZNF528Q3MIS6 628 aa16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 CRELD2Q6UXH1 353 aaPredicted RBP16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 SFR1Q86XK3 245 aa16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 ELMOD1Q8N336 334 aa16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 ZBTB44Q8NCP5 570 aa16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 LARP4BQ92615 738 aaKnown RBP16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 ZFYVE19Q96K21 471 aa16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 HINFPQ9BQA5 517 aa16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 TRPV4Q9HBA0 871 aa16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 C2orf42Q9NWW7 574 aa16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 PIAS3Q9Y6X2 628 aa16.5■□□□□ 0.23
SNX29P1-201ENST00000548357 OR6C75A6NL08 312 aa16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 H0YCG3 227 aa16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 SLC26A4O43511 780 aa16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 PPP1R37O75864 691 aa16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 PRAMEF12O95522 483 aa16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 KRT18P05783 430 aaKnown RBP16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 TYMPP19971 482 aa16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 ADSSP30520 456 aa16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 LONP1P36776 959 aaKnown RBP16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 CYP4F8P98187 520 aa16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 TMEM132DQ14C87 1099 aa16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 TXNDC11Q6PKC3 985 aa16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 DYMQ7RTS9 669 aa16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 USP37Q86T82 979 aa16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 LRRTM3Q86VH5 581 aa16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 TTC8Q8TAM2 541 aa16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 RUBCNQ92622 972 aa16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 CLIC6Q96NY7 704 aa16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 CHRDQ9H2X0 955 aa16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 SLITRK6Q9H5Y7 841 aa16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 RBM12Q9NTZ6 932 aaKnown RBP16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 FBXO2Q9UK22 296 aaPredicted RBP16.49■□□□□ 0.23
SNX29P1-201ENST00000548357 A0A087X0B3 334 aa16.48■□□□□ 0.23
SNX29P1-201ENST00000548357 VPS37CA5D8V6 355 aaPredicted RBP16.48■□□□□ 0.23
SNX29P1-201ENST00000548357 SLC38A8A6NNN8 435 aa16.48■□□□□ 0.23
SNX29P1-201ENST00000548357 TBCAO75347 108 aaKnown RBP16.48■□□□□ 0.23
SNX29P1-201ENST00000548357 CCNE1P24864 410 aa16.48■□□□□ 0.23
SNX29P1-201ENST00000548357 CASP5P51878 434 aa16.48■□□□□ 0.23
SNX29P1-201ENST00000548357 DMWDQ09019 674 aa16.48■□□□□ 0.23
SNX29P1-201ENST00000548357 RESTQ13127 1097 aa16.48■□□□□ 0.23
SNX29P1-201ENST00000548357 MYBPC2Q14324 1141 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms