RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 TNNI1P19237 187 aa20.19■□□□□ 0.82
PRPF40B-206ENST00000547764 CASP4P49662 377 aa20.19■□□□□ 0.82
PRPF40B-206ENST00000547764 LIN9Q5TKA1 542 aa20.19■□□□□ 0.82
PRPF40B-206ENST00000547764 LRRC52Q8N7C0 313 aa20.19■□□□□ 0.82
PRPF40B-206ENST00000547764 PLEKHO2Q8TD55 490 aa20.19■□□□□ 0.82
PRPF40B-206ENST00000547764 RHOBTB2Q9BYZ6 727 aa20.19■□□□□ 0.82
PRPF40B-206ENST00000547764 PRKD2Q9BZL6 878 aa20.19■□□□□ 0.82
PRPF40B-206ENST00000547764 TSHZ2Q9NRE2 1034 aa20.19■□□□□ 0.82
PRPF40B-206ENST00000547764 BDP1A6H8Y1 2624 aa20.19■□□□□ 0.82
PRPF40B-206ENST00000547764 LOC730098B7Z3J9 87 aa20.18■□□□□ 0.82
PRPF40B-206ENST00000547764 PRCPP42785 496 aa20.18■□□□□ 0.82
PRPF40B-206ENST00000547764 NFIL3Q16649 462 aa20.18■□□□□ 0.82
PRPF40B-206ENST00000547764 PPM1LQ5SGD2 360 aa20.18■□□□□ 0.82
PRPF40B-206ENST00000547764 CEP135Q66GS9 1140 aa20.18■□□□□ 0.82
PRPF40B-206ENST00000547764 CYP26C1Q6V0L0 522 aa20.18■□□□□ 0.82
PRPF40B-206ENST00000547764 CLEC17AQ6ZS10 378 aa20.18■□□□□ 0.82
PRPF40B-206ENST00000547764 TRAPPC11Q7Z392 1133 aa20.18■□□□□ 0.82
PRPF40B-206ENST00000547764 SLC7A14Q8TBB6 771 aa20.18■□□□□ 0.82
PRPF40B-206ENST00000547764 SMG7Q92540 1137 aaKnown RBP20.18■□□□□ 0.82
PRPF40B-206ENST00000547764 ZNF516Q92618 1163 aa20.18■□□□□ 0.82
PRPF40B-206ENST00000547764 OXCT2Q9BYC2 517 aaPredicted RBP20.18■□□□□ 0.82
PRPF40B-206ENST00000547764 DSEQ9UL01 958 aa20.18■□□□□ 0.82
PRPF40B-206ENST00000547764 OR6C75A6NL08 312 aa20.17■□□□□ 0.82
PRPF40B-206ENST00000547764 ATF2P15336 505 aa20.17■□□□□ 0.82
PRPF40B-206ENST00000547764 SP100P23497 879 aaPredicted RBP20.17■□□□□ 0.82
PRPF40B-206ENST00000547764 NR2F2P24468 414 aa20.17■□□□□ 0.82
PRPF40B-206ENST00000547764 BFSP1Q12934 665 aa20.17■□□□□ 0.82
PRPF40B-206ENST00000547764 UVSSAQ2YD98 709 aa20.17■□□□□ 0.82
PRPF40B-206ENST00000547764 ZCWPW2Q504Y3 356 aa20.17■□□□□ 0.82
PRPF40B-206ENST00000547764 COBLL1Q53SF7 1204 aa20.17■□□□□ 0.82
PRPF40B-206ENST00000547764 WSCD1Q658N2 575 aa20.17■□□□□ 0.82
PRPF40B-206ENST00000547764 TPGS2Q68CL5 300 aa20.17■□□□□ 0.82
PRPF40B-206ENST00000547764 METTL23Q86XA0 190 aa20.17■□□□□ 0.82
PRPF40B-206ENST00000547764 PARD3BQ8TEW8 1205 aa20.17■□□□□ 0.82
PRPF40B-206ENST00000547764 PIDD1Q9HB75 910 aa20.17■□□□□ 0.82
PRPF40B-206ENST00000547764 MAN1B1Q9UKM7 699 aa20.17■□□□□ 0.82
PRPF40B-206ENST00000547764 FRMD4BQ9Y2L6 1034 aa20.17■□□□□ 0.82
PRPF40B-206ENST00000547764 R3HCC1Q9Y3T6 440 aaKnown RBP20.17■□□□□ 0.82
PRPF40B-206ENST00000547764 C2orf16Q68DN1 1984 aa20.17■□□□□ 0.82
PRPF40B-206ENST00000547764 HNRNPA1P09651 372 aaKnown RBP eCLIP20.16■□□□□ 0.82
PRPF40B-206ENST00000547764 OR4Q2P0C623 313 aa20.16■□□□□ 0.82
PRPF40B-206ENST00000547764 CPB1P15086 417 aa20.16■□□□□ 0.82
PRPF40B-206ENST00000547764 HOXA9P31269 272 aa20.16■□□□□ 0.82
PRPF40B-206ENST00000547764 ELF1P32519 619 aa20.16■□□□□ 0.82
PRPF40B-206ENST00000547764 ISM2Q6H9L7 571 aa20.16■□□□□ 0.82
PRPF40B-206ENST00000547764 RNF19BQ6ZMZ0 732 aa20.16■□□□□ 0.82
PRPF40B-206ENST00000547764 CCDC149Q6ZUS6 474 aa20.16■□□□□ 0.82
PRPF40B-206ENST00000547764 HPDLQ96IR7 371 aa20.16■□□□□ 0.82
PRPF40B-206ENST00000547764 GTPBP4Q9BZE4 634 aaKnown RBP20.16■□□□□ 0.82
PRPF40B-206ENST00000547764 GDAP2Q9NXN4 497 aa20.16■□□□□ 0.82
PRPF40B-206ENST00000547764 AFF4Q9UHB7 1163 aaKnown RBP20.16■□□□□ 0.82
PRPF40B-206ENST00000547764 LRRIQ3A6PVS8 624 aaPredicted RBP20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 PRRG1O14668 218 aa20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 CCL16O15467 120 aa20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 AKAP3O75969 853 aa20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 SEC24AO95486 1093 aa20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 CST3P01034 146 aaPredicted RBP20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 RPL13P26373 211 aaKnown RBP20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 CLDN10P78369 228 aa20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 ADCY1Q08828 1119 aa20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 MYO1EQ12965 1108 aa20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 ADAM9Q13443 819 aa20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 RTL10Q7L3V2 364 aa20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 TCEAL8Q8IYN2 117 aa20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 OR10T2Q8NGX3 314 aa20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 KHSRPQ92945 711 aaKnown RBP eCLIP20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 TMEM209Q96SK2 561 aa20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 RTP3Q9BQQ7 232 aa20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 CYP4F11Q9HBI6 524 aa20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 WDR6Q9NNW5 1121 aaKnown RBP20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 NR2E1Q9Y466 385 aa20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 SNX9Q9Y5X1 595 aa20.15■□□□□ 0.82
PRPF40B-206ENST00000547764 TSC2P49815 1807 aa20.14■□□□□ 0.81
PRPF40B-206ENST00000547764 MAPK13O15264 365 aa20.14■□□□□ 0.81
PRPF40B-206ENST00000547764 HUS1O60921 280 aa20.14■□□□□ 0.81
PRPF40B-206ENST00000547764 DLG4P78352 724 aa20.14■□□□□ 0.81
PRPF40B-206ENST00000547764 GPR17Q13304 367 aa20.14■□□□□ 0.81
PRPF40B-206ENST00000547764 EDRF1Q3B7T1 1238 aa20.14■□□□□ 0.81
PRPF40B-206ENST00000547764 CENPPQ6IPU0 288 aa20.14■□□□□ 0.81
PRPF40B-206ENST00000547764 RNF135Q8IUD6 432 aa20.14■□□□□ 0.81
PRPF40B-206ENST00000547764 ADSSL1Q8N142 457 aa20.14■□□□□ 0.81
PRPF40B-206ENST00000547764 THEM5Q8N1Q8 247 aa20.14■□□□□ 0.81
PRPF40B-206ENST00000547764 PDCL2Q8N4E4 241 aa20.14■□□□□ 0.81
PRPF40B-206ENST00000547764 TMC2Q8TDI7 906 aa20.14■□□□□ 0.81
PRPF40B-206ENST00000547764 MAFFQ9ULX9 164 aa20.14■□□□□ 0.81
PRPF40B-206ENST00000547764 L1RE1Q9UN81 338 aa20.14■□□□□ 0.81
PRPF40B-206ENST00000547764 CLUHO75153 1309 aa20.13■□□□□ 0.81
PRPF40B-206ENST00000547764 C2CD4DB7Z1M9 353 aa20.13■□□□□ 0.81
PRPF40B-206ENST00000547764 XYLBO75191 536 aa20.13■□□□□ 0.81
PRPF40B-206ENST00000547764 VNN2O95498 520 aa20.13■□□□□ 0.81
PRPF40B-206ENST00000547764 AP3M2P53677 418 aa20.13■□□□□ 0.81
PRPF40B-206ENST00000547764 GRASPQ7Z6J2 395 aaPredicted RBP20.13■□□□□ 0.81
PRPF40B-206ENST00000547764 TOP6BLQ8N6T0 577 aa20.13■□□□□ 0.81
PRPF40B-206ENST00000547764 PGLYRP2Q96PD5 576 aa20.13■□□□□ 0.81
PRPF40B-206ENST00000547764 POLIQ9UNA4 740 aa20.13■□□□□ 0.81
PRPF40B-206ENST00000547764 USTQ9Y2C2 406 aa20.13■□□□□ 0.81
PRPF40B-206ENST00000547764 DENND4AQ7Z401 1863 aa20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 BIN1O00499 593 aa20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 PHACTR2O75167 634 aa20.12■□□□□ 0.81
PRPF40B-206ENST00000547764 C4BPAP04003 597 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms