RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 ACSF2Q96CM8 615 aaPredicted RBP7.53□□□□□ -1.2
CCDC60-205ENST00000546345 CASD1Q96PB1 797 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 MYADMQ96S97 322 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 VN1R3Q9BXE9 311 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 LRRC3Q9BY71 257 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 GTPBP4Q9BZE4 634 aaKnown RBP7.53□□□□□ -1.2
CCDC60-205ENST00000546345 NACAP1Q9BZK3 213 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 SFXN1Q9H9B4 322 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 JMJD4Q9H9V9 463 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 PRMT8Q9NR22 394 aaPredicted RBP7.53□□□□□ -1.2
CCDC60-205ENST00000546345 TCP11L1Q9NUJ3 509 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 UBP1Q9NZI7 540 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 ADAM30Q9UKF2 790 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 FBXO4Q9UKT5 387 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 CORINQ9Y5Q5 1042 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 MYO16Q9Y6X6 1858 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.52□□□□□ -1.21
CCDC60-205ENST00000546345 TGFB1P01137 390 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 ZFYP08048 801 aaPredicted RBP7.52□□□□□ -1.21
CCDC60-205ENST00000546345 CCND2P30279 289 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 DDIT3P35638 169 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 PPM1AP35813 382 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 TCF7P36402 384 aaPredicted RBP7.52□□□□□ -1.21
CCDC60-205ENST00000546345 GRIK1P39086 918 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 NKG7Q16617 165 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 LETM2Q2VYF4 491 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 CLLU1OSQ5K130 101 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 SLC6A19Q695T7 634 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 TSSK4Q6SA08 328 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 UNQ6494/PRO21346Q6UXR6 183 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 ARMCX6Q7L4S7 300 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 RSPH3Q86UC2 560 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 TBC1D10CQ8IV04 446 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 LRRC43Q8N309 656 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 SLC44A3Q8N4M1 653 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 TOP6BLQ8N6T0 577 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 MAP4K1Q92918 833 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 NKD1Q969G9 470 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 EAF1Q96JC9 268 aaPredicted RBP7.52□□□□□ -1.21
CCDC60-205ENST00000546345 ZNF558Q96NG5 402 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 PCYT2Q99447 389 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 ADAM2Q99965 735 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 DDX23Q9BUQ8 820 aaKnown RBP7.52□□□□□ -1.21
CCDC60-205ENST00000546345 DUSP23Q9BVJ7 150 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 BRMS1Q9HCU9 246 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 RGS18Q9NS28 235 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 TMEM161AQ9NX61 479 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 EPS15L1Q9UBC2 864 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 POLR3KQ9Y2Y1 108 aaPredicted RBP7.52□□□□□ -1.21
CCDC60-205ENST00000546345 MRPL11Q9Y3B7 192 aaKnown RBP7.52□□□□□ -1.21
CCDC60-205ENST00000546345 NOC2LQ9Y3T9 749 aaKnown RBP7.52□□□□□ -1.21
CCDC60-205ENST00000546345 MTF2Q9Y483 593 aaPredicted RBP7.52□□□□□ -1.21
CCDC60-205ENST00000546345 PCDHB7Q9Y5E2 793 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 CELSR3Q9NYQ7 3312 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 NEDD4P46934 1319 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 BPTFQ12830 3046 aa7.52□□□□□ -1.21
CCDC60-205ENST00000546345 GSTTP1A0A1W2PQM5 241 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 RAB11FIP3O75154 756 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 STARD6P59095 220 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 IGBP1P78318 339 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 CSTF1Q05048 431 aaKnown RBP7.51□□□□□ -1.21
CCDC60-205ENST00000546345 HTR4Q13639 388 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 LPAL2Q16609 132 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 KLHL40Q2TBA0 621 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 SEZ6Q53EL9 994 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 DCLRE1AQ6PJP8 1040 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 SLC24A5Q71RS6 500 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 FAM228AQ86W67 206 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 MCATQ8IVS2 390 aaKnown RBP7.51□□□□□ -1.21
CCDC60-205ENST00000546345 FTSJ3Q8IY81 847 aaKnown RBP7.51□□□□□ -1.21
CCDC60-205ENST00000546345 MFSD2AQ8NA29 543 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 ST13P5Q8NFI4 369 aaPredicted RBP7.51□□□□□ -1.21
CCDC60-205ENST00000546345 MTMR8Q96EF0 704 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 TMEM87BQ96K49 555 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 CELF4Q9BZC1 486 aaKnown RBP7.51□□□□□ -1.21
CCDC60-205ENST00000546345 TMEM117Q9H0C3 514 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 SLKQ9H2G2 1235 aaPredicted RBP7.51□□□□□ -1.21
CCDC60-205ENST00000546345 SLC2A4RGQ9NR83 387 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 C1orf112Q9NSG2 853 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 ECHDC1Q9NTX5 307 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 SPATA6Q9NWH7 488 aaPredicted RBP7.51□□□□□ -1.21
CCDC60-205ENST00000546345 ZSCAN32Q9NX65 697 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 SPG21Q9NZD8 308 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 TJP2Q9UDY2 1190 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 PUF60Q9UHX1 559 aaKnown RBP7.51□□□□□ -1.21
CCDC60-205ENST00000546345 NOL7Q9UMY1 257 aaKnown RBP7.51□□□□□ -1.21
CCDC60-205ENST00000546345 WASF3Q9UPY6 502 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.51□□□□□ -1.21
CCDC60-205ENST00000546345 IRAK3Q9Y616 596 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 ASCC3Q8N3C0 2202 aaKnown RBP7.51□□□□□ -1.21
CCDC60-205ENST00000546345 CLUHO75153 1309 aa7.51□□□□□ -1.21
CCDC60-205ENST00000546345 TNRC6BQ9UPQ9 1833 aaKnown RBP7.5□□□□□ -1.21
CCDC60-205ENST00000546345 SHISA7A6NL88 538 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 NT5C1B-RDH14C9J2C7 533 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 ANHXE9PGG2 379 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 CYP26A1O43174 497 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 FIBPO43427 364 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 B4GALT3O60512 393 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 LEFTY1O75610 366 aa7.5□□□□□ -1.21
CCDC60-205ENST00000546345 LETM1O95202 739 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms