RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 IGFBP6P24592 240 aaPredicted RBP11.54□□□□□ -0.56
PAAF1-216ENST00000546039 YWHAEP62258 255 aaKnown RBP11.54□□□□□ -0.56
PAAF1-216ENST00000546039 PLCB2Q00722 1185 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 GCNT1Q02742 428 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 KCNMA1Q12791 1236 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 GPM6BQ13491 265 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 BMS1Q14692 1282 aaKnown RBP11.54□□□□□ -0.56
PAAF1-216ENST00000546039 NR1I3Q14994 352 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 SYCP1Q15431 976 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 USP41Q3LFD5 358 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 FAM171A1Q5VUB5 890 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 PDXDC1Q6P996 788 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 LIMS2Q7Z4I7 341 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 SPRED2Q7Z698 418 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 GPR65Q8IYL9 337 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 TMEM86AQ8N2M4 240 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 TTC39CQ8N584 583 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 MMS19Q96T76 1030 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 TTPALQ9BTX7 342 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 LSM14BQ9BX40 385 aaKnown RBP11.54□□□□□ -0.56
PAAF1-216ENST00000546039 VN1R3Q9BXE9 311 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 BCO2Q9BYV7 579 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 GPR62Q9BZJ7 368 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 XPO4Q9C0E2 1151 aaKnown RBP11.54□□□□□ -0.56
PAAF1-216ENST00000546039 LMAN2LQ9H0V9 348 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 CYP3A43Q9HB55 503 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 APOBEC3GQ9HC16 384 aaKnown RBP11.54□□□□□ -0.56
PAAF1-216ENST00000546039 APEX2Q9UBZ4 518 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 L1RE1Q9UN81 338 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 POLIQ9UNA4 740 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 SIK3Q9Y2K2 1263 aa11.54□□□□□ -0.56
PAAF1-216ENST00000546039 LAMA3Q16787 3333 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 TEX33O43247 280 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 LRRN2O75325 713 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 TACC1O75410 805 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 TKTP29401 623 aaKnown RBP11.53□□□□□ -0.56
PAAF1-216ENST00000546039 ASPAP45381 313 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 GLUD2P49448 558 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 DSG1Q02413 1049 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 CREMQ03060 361 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 LRMPQ12912 555 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 CUL2Q13617 745 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 SOWAHAQ2M3V2 549 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 SMYD5Q6GMV2 418 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 KIAA1841Q6NSI8 718 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 SCARA5Q6ZMJ2 495 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 ANKS3Q6ZW76 656 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 ENOSF1Q7L5Y1 443 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 METTL23Q86XA0 190 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 ADGRF2Q8IZF7 708 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 VPS52Q8N1B4 723 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 PPM1KQ8N3J5 372 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 PDCL2Q8N4E4 241 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 SPPL3Q8TCT6 385 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 POF1BQ8WVV4 589 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 ARNTL2Q8WYA1 636 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 PIK3R5Q8WYR1 880 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 PCMTD1Q96MG8 357 aaPredicted RBP11.53□□□□□ -0.56
PAAF1-216ENST00000546039 TRIM5Q9C035 493 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 ZBP1Q9H171 429 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 ZNF576Q9H609 170 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 SMYD3Q9H7B4 428 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 SIX2Q9NPC8 291 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.53□□□□□ -0.562e-8■■■■■ 67.3
PAAF1-216ENST00000546039 TLR9Q9NR96 1032 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 SSX2IPQ9Y2D8 614 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 CHD9Q3L8U1 2897 aa11.53□□□□□ -0.56
PAAF1-216ENST00000546039 GREB1Q4ZG55 1949 aa11.52□□□□□ -0.56
PAAF1-216ENST00000546039 CHD7Q9P2D1 2997 aa11.52□□□□□ -0.56
PAAF1-216ENST00000546039 ZNF638Q14966 1978 aaKnown RBP11.52□□□□□ -0.56
PAAF1-216ENST00000546039 FSD2A1L4K1 749 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 GOLGA6L3A6NEY3 463 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 H7C4K7 107 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 GRM6O15303 877 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 CTSAP10619 480 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 WARSP23381 471 aaKnown RBP11.52□□□□□ -0.57
PAAF1-216ENST00000546039 PBX1P40424 430 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 LHX1P48742 406 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 YWHAHQ04917 246 aaPredicted RBP11.52□□□□□ -0.57
PAAF1-216ENST00000546039 INCA1Q0VD86 236 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 RTP2Q5QGT7 225 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 VARS2Q5ST30 1063 aaKnown RBP11.52□□□□□ -0.57
PAAF1-216ENST00000546039 ZNF697Q5TEC3 545 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 KLHDC7AQ5VTJ3 777 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 WSCD1Q658N2 575 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 OVOS1Q6IE37 1185 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 PDE12Q6L8Q7 609 aaKnown RBP11.52□□□□□ -0.57
PAAF1-216ENST00000546039 ZNF280DQ6N043 979 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 PHLDB3Q6NSJ2 640 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 CEP57Q86XR8 500 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 ARHGEF19Q8IW93 802 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 NEK11Q8NG66 645 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 GDPD5Q8WTR4 605 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 TATDN2Q93075 761 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 JAKMIP2Q96AA8 810 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 ELMO3Q96BJ8 720 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 IQCDQ96DY2 449 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 OXCT2Q9BYC2 517 aaPredicted RBP11.52□□□□□ -0.57
PAAF1-216ENST00000546039 DNAI2Q9GZS0 605 aa11.52□□□□□ -0.57
PAAF1-216ENST00000546039 GANQ9H2C0 597 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms