RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 TBC1D10BQ4KMP7 808 aaPredicted RBP13.2□□□□□ -0.3
PAAF1-215ENST00000544909 RNF187Q5TA31 235 aaPredicted RBP13.2□□□□□ -0.3
PAAF1-215ENST00000544909 HIBCHQ6NVY1 386 aaPredicted RBP13.2□□□□□ -0.3
PAAF1-215ENST00000544909 ARHGEF18Q6ZSZ5 1173 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 PLPPR4Q7Z2D5 763 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 ANKS1BQ7Z6G8 1248 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 EXOC3L1Q86VI1 746 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 MAGEC3Q8TD91 643 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 EPS8L3Q8TE67 593 aaKnown RBP13.2□□□□□ -0.3
PAAF1-215ENST00000544909 ARHGEF2Q92974 986 aaKnown RBP13.2□□□□□ -0.3
PAAF1-215ENST00000544909 ZKSCAN4Q969J2 545 aaPredicted RBP13.2□□□□□ -0.3
PAAF1-215ENST00000544909 GRAMD1AQ96CP6 724 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 FAM212AQ96EL1 285 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 SGSM3Q96HU1 749 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 CFAP57Q96MR6 1250 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 SELENOSQ9BQE4 189 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 TARS2Q9BW92 718 aaKnown RBP13.2□□□□□ -0.3
PAAF1-215ENST00000544909 NFKBIZQ9BYH8 718 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 OSBPL7Q9BZF2 842 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 LHX5Q9H2C1 402 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 NUB1Q9Y5A7 615 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 CD2APQ9Y5K6 639 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 PTPRJQ12913 1337 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 ANKRD65E5RJM6 399 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 B4GALT4O60513 344 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 LGR5O75473 907 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 ITGAVP06756 1048 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 POU5F1BQ06416 359 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 ACAP1Q15027 740 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 QPCTQ16769 361 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 EAPPQ56P03 285 aaPredicted RBP13.2□□□□□ -0.3
PAAF1-215ENST00000544909 TTC13Q8NBP0 860 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 KAT2BQ92831 832 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 TMEM143Q96AN5 459 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 CCDC114Q96M63 670 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 HAPLN2Q9GZV7 340 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 EURLQ9NYK6 297 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 WDR35Q9P2L0 1181 aa13.2□□□□□ -0.3
PAAF1-215ENST00000544909 LRRC37A2A6NM11 1700 aa13.19□□□□□ -0.3
PAAF1-215ENST00000544909 GSTTP1A0A1W2PQM5 241 aa13.19□□□□□ -0.3
PAAF1-215ENST00000544909 CCT8L1PA6NM43 557 aa13.19□□□□□ -0.3
PAAF1-215ENST00000544909 LIASO43766 372 aa13.19□□□□□ -0.3
PAAF1-215ENST00000544909 SLC25A27O95847 323 aa13.19□□□□□ -0.3
PAAF1-215ENST00000544909 PROZP22891 400 aa13.19□□□□□ -0.3
PAAF1-215ENST00000544909 IFI35P80217 286 aaPredicted RBP13.19□□□□□ -0.3
PAAF1-215ENST00000544909 MAPK6Q16659 721 aa13.19□□□□□ -0.3
PAAF1-215ENST00000544909 PPP1R15BQ5SWA1 713 aa13.19□□□□□ -0.3
PAAF1-215ENST00000544909 TRMT1LQ7Z2T5 733 aaKnown RBP13.19□□□□□ -0.3
PAAF1-215ENST00000544909 PCGF5Q86SE9 256 aa13.19□□□□□ -0.3
PAAF1-215ENST00000544909 PDGFDQ9GZP0 370 aaPredicted RBP13.19□□□□□ -0.3
PAAF1-215ENST00000544909 PCDH9Q9HC56 1237 aa13.19□□□□□ -0.3
PAAF1-215ENST00000544909 ANKFY1Q9P2R3 1169 aa13.19□□□□□ -0.3
PAAF1-215ENST00000544909 CPSF3Q9UKF6 684 aaKnown RBP13.19□□□□□ -0.3
PAAF1-215ENST00000544909 ZNF541Q9H0D2 1346 aa13.19□□□□□ -0.3
PAAF1-215ENST00000544909 CFAP73A6NFT4 308 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 DNALI1O14645 258 aaPredicted RBP13.18□□□□□ -0.3
PAAF1-215ENST00000544909 IRF6O14896 467 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 MED7O43513 233 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 IL18RAPO95256 599 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 OAS1P00973 400 aaKnown RBP13.18□□□□□ -0.3
PAAF1-215ENST00000544909 TSHRP16473 764 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 HNRNPH1P31943 449 aaKnown RBP13.18□□□□□ -0.3
PAAF1-215ENST00000544909 TFDP1Q14186 410 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 KYAT1Q16773 422 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 ZC3H12AQ5D1E8 599 aaKnown RBP13.18□□□□□ -0.3
PAAF1-215ENST00000544909 TFDP3Q5H9I0 405 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 ANGEL2Q5VTE6 544 aaKnown RBP13.18□□□□□ -0.3
PAAF1-215ENST00000544909 DNAJC24Q6P3W2 148 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 TSHZ1Q6ZSZ6 1077 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 CCDC25Q86WR0 208 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 CPNE8Q86YQ8 564 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 TTC39CQ8N584 583 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 MDM1Q8TC05 714 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 ZNF526Q8TF50 670 aaPredicted RBP13.18□□□□□ -0.3
PAAF1-215ENST00000544909 SLITRK1Q96PX8 696 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 PCYT2Q99447 389 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 ACO2Q99798 780 aaKnown RBP13.18□□□□□ -0.3
PAAF1-215ENST00000544909 PAPPA2Q9BXP8 1791 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 TRIM7Q9C029 511 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 MTFR1LQ9H019 292 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 NINJ2Q9NZG7 142 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 SLC12A4Q9UP95 1085 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 PTPRFP10586 1907 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 ABLIM1O14639 778 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 SNX3O60493 162 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 KRT7P08729 469 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 WNT7BP56706 349 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 TAS2R40P59535 323 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 CBLBQ13191 982 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 CCDC142Q17RM4 750 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 IZUMO3Q5VZ72 239 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 RGS9BPQ6ZS82 235 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 ALLCQ8N6M5 410 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 OR5B17Q8NGF7 314 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 ATG4AQ8WYN0 398 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 VRTNQ9H8Y1 702 aa13.18□□□□□ -0.3
PAAF1-215ENST00000544909 SSU72Q9NP77 194 aaKnown RBP13.18□□□□□ -0.3
PAAF1-215ENST00000544909 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.18□□□□□ -0.32e-8■■■■■ 67.3
PAAF1-215ENST00000544909 TMEM120BA0PK00 339 aa13.17□□□□□ -0.3
PAAF1-215ENST00000544909 SUN1O94901 812 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms