RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 ELOVL4Q9GZR5 314 aa14.58□□□□□ -0.07
HCFC2-202ENST00000544223 TRMT13Q9NUP7 481 aaKnown RBP14.58□□□□□ -0.07
HCFC2-202ENST00000544223 IL18RAPO95256 599 aa14.58□□□□□ -0.08
HCFC2-202ENST00000544223 CYP1A1P04798 512 aaPredicted RBP14.58□□□□□ -0.08
HCFC2-202ENST00000544223 CYP1A2P05177 515 aa14.58□□□□□ -0.08
HCFC2-202ENST00000544223 GLI1P08151 1106 aa14.58□□□□□ -0.08
HCFC2-202ENST00000544223 ENPEPQ07075 957 aa14.58□□□□□ -0.08
HCFC2-202ENST00000544223 IFI16Q16666 785 aaKnown RBP14.58□□□□□ -0.08
HCFC2-202ENST00000544223 TMCO3Q6UWJ1 677 aa14.58□□□□□ -0.08
HCFC2-202ENST00000544223 MON1BQ7L1V2 547 aa14.58□□□□□ -0.08
HCFC2-202ENST00000544223 FAM228AQ86W67 206 aa14.58□□□□□ -0.08
HCFC2-202ENST00000544223 FMNL3Q8IVF7 1028 aa14.58□□□□□ -0.08
HCFC2-202ENST00000544223 USP38Q8NB14 1042 aa14.58□□□□□ -0.08
HCFC2-202ENST00000544223 MSANTD4Q8NCY6 345 aa14.58□□□□□ -0.08
HCFC2-202ENST00000544223 ERVK-5Q9HDB9 667 aa14.58□□□□□ -0.08
HCFC2-202ENST00000544223 KLHL11Q9NVR0 708 aa14.58□□□□□ -0.08
HCFC2-202ENST00000544223 ADAM22Q9P0K1 906 aa14.58□□□□□ -0.08
HCFC2-202ENST00000544223 USTQ9Y2C2 406 aa14.58□□□□□ -0.08
HCFC2-202ENST00000544223 DAAM1Q9Y4D1 1078 aa14.58□□□□□ -0.08
HCFC2-202ENST00000544223 NME7Q9Y5B8 376 aa14.58□□□□□ -0.08
HCFC2-202ENST00000544223 CDY2AQ9Y6F7 541 aa14.58□□□□□ -0.08
HCFC2-202ENST00000544223 SEPT4O43236 478 aa14.57□□□□□ -0.08
HCFC2-202ENST00000544223 SOX4Q06945 474 aaPredicted RBP14.57□□□□□ -0.08
HCFC2-202ENST00000544223 UBXN11Q5T124 520 aa14.57□□□□□ -0.08
HCFC2-202ENST00000544223 TWF2Q6IBS0 349 aaKnown RBP14.57□□□□□ -0.08
HCFC2-202ENST00000544223 NOTUMQ6P988 496 aa14.57□□□□□ -0.08
HCFC2-202ENST00000544223 UBA3Q8TBC4 463 aa14.57□□□□□ -0.08
HCFC2-202ENST00000544223 CELF4Q9BZC1 486 aaKnown RBP14.57□□□□□ -0.08
HCFC2-202ENST00000544223 SPOPO43791 374 aa14.57□□□□□ -0.08
HCFC2-202ENST00000544223 ADAMTS4O75173 837 aa14.57□□□□□ -0.08
HCFC2-202ENST00000544223 CHRNA1P02708 482 aa14.57□□□□□ -0.08
HCFC2-202ENST00000544223 RAD23BP54727 409 aa14.57□□□□□ -0.08
HCFC2-202ENST00000544223 GJA9P57773 515 aa14.57□□□□□ -0.08
HCFC2-202ENST00000544223 LONRF2Q1L5Z9 754 aa14.57□□□□□ -0.08
HCFC2-202ENST00000544223 RHOT2Q8IXI1 618 aa14.57□□□□□ -0.08
HCFC2-202ENST00000544223 ACSF2Q96CM8 615 aaPredicted RBP14.57□□□□□ -0.08
HCFC2-202ENST00000544223 CCDC94Q9BW85 323 aaPredicted RBP14.57□□□□□ -0.08
HCFC2-202ENST00000544223 GTF3C4Q9UKN8 822 aa14.57□□□□□ -0.08
HCFC2-202ENST00000544223 CNTN6Q9UQ52 1028 aa14.57□□□□□ -0.08
HCFC2-202ENST00000544223 SNX9Q9Y5X1 595 aa14.57□□□□□ -0.08
HCFC2-202ENST00000544223 RANBP2P49792 3224 aaKnown RBP14.57□□□□□ -0.08
HCFC2-202ENST00000544223 SCN10AQ9Y5Y9 1956 aa14.56□□□□□ -0.08
HCFC2-202ENST00000544223 PYGMP11217 842 aa14.56□□□□□ -0.08
HCFC2-202ENST00000544223 GRM5P41594 1212 aa14.56□□□□□ -0.08
HCFC2-202ENST00000544223 AP3M2P53677 418 aa14.56□□□□□ -0.08
HCFC2-202ENST00000544223 CENPCQ03188 943 aa14.56□□□□□ -0.08
HCFC2-202ENST00000544223 SURF1Q15526 300 aa14.56□□□□□ -0.08
HCFC2-202ENST00000544223 ZDHHC14Q8IZN3 488 aa14.56□□□□□ -0.08
HCFC2-202ENST00000544223 SLC4A11Q8NBS3 891 aa14.56□□□□□ -0.08
HCFC2-202ENST00000544223 RNF169Q8NCN4 708 aa14.56□□□□□ -0.08
HCFC2-202ENST00000544223 FAM118BQ9BPY3 351 aa14.56□□□□□ -0.08
HCFC2-202ENST00000544223 MRPL45Q9BRJ2 306 aaKnown RBP14.56□□□□□ -0.08
HCFC2-202ENST00000544223 AGO3Q9H9G7 860 aaKnown RBP14.56□□□□□ -0.08
HCFC2-202ENST00000544223 CREBZFQ9NS37 354 aa14.56□□□□□ -0.08
HCFC2-202ENST00000544223 GTF2IRD1Q9UHL9 959 aa14.56□□□□□ -0.08
HCFC2-202ENST00000544223 GOLGA8SH3BPF8 625 aa14.56□□□□□ -0.08
HCFC2-202ENST00000544223 ZRANB2O95218 330 aaKnown RBP eCLIP14.56□□□□□ -0.08
HCFC2-202ENST00000544223 DDX42Q86XP3 938 aaKnown RBP eCLIP14.56□□□□□ -0.08
HCFC2-202ENST00000544223 SYCE1Q8N0S2 351 aa14.56□□□□□ -0.08
HCFC2-202ENST00000544223 SMG8Q8ND04 991 aaKnown RBP14.56□□□□□ -0.08
HCFC2-202ENST00000544223 UBE2Q2Q8WVN8 375 aa14.56□□□□□ -0.08
HCFC2-202ENST00000544223 SNX27Q96L92 541 aa14.56□□□□□ -0.08
HCFC2-202ENST00000544223 RNPC3Q96LT9 517 aaKnown RBP14.56□□□□□ -0.08
HCFC2-202ENST00000544223 MTG1Q9BT17 334 aaPredicted RBP14.56□□□□□ -0.08
HCFC2-202ENST00000544223 IPPQ9Y573 584 aa14.56□□□□□ -0.08
HCFC2-202ENST00000544223 TULP2O00295 520 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 KRIT1O00522 736 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 SPTLC1O15269 473 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 RAD51CO43502 376 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 THPOP40225 353 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 SSR1P43307 286 aaKnown RBP14.55□□□□□ -0.08
HCFC2-202ENST00000544223 VEGFBP49765 207 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 NDST1P52848 882 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 PTP4A2Q12974 167 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 MAMLD1Q13495 774 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 ATP13A4Q4VNC1 1196 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 BEND6Q5SZJ8 279 aaPredicted RBP14.55□□□□□ -0.08
HCFC2-202ENST00000544223 FAM182AQ5T1J6 154 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 IFT81Q8WYA0 676 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 HEXIM2Q96MH2 286 aaKnown RBP14.55□□□□□ -0.08
HCFC2-202ENST00000544223 ASB7Q9H672 318 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 FAM49BQ9NUQ9 324 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 ARGLU1Q9NWB6 273 aaPredicted RBP14.55□□□□□ -0.08
HCFC2-202ENST00000544223 SMIM28A0A1B0GU29 152 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 PDGFRBP09619 1106 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 CYP3A5P20815 502 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 BPIFB4P59827 614 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 GUCY2DQ02846 1103 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 C8orf74Q6P047 294 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 HERPUD2Q9BSE4 406 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 KATNAL1Q9BW62 490 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 BCO2Q9BYV7 579 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 DPEP3Q9H4B8 488 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 ARFGAP3Q9NP61 516 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 AMACRQ9UHK6 382 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 RAB21Q9UL25 225 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 ST3GAL5Q9UNP4 418 aa14.55□□□□□ -0.08
HCFC2-202ENST00000544223 CRYBB1P53674 252 aaPredicted RBP14.54□□□□□ -0.08
HCFC2-202ENST00000544223 ACOT1Q86TX2 421 aa14.54□□□□□ -0.08
HCFC2-202ENST00000544223 MCEEQ96PE7 176 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms