RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 TMEM63BQ5T3F8 832 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 ATF7IP2Q5U623 682 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 FASTKD5Q7L8L6 764 aaKnown RBP14.78□□□□□ -0.04
MSH2-206ENST00000543555 DCLK3Q9C098 648 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 SEMA4AQ9H3S1 761 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 FZD8Q9H461 694 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 CISHQ9NSE2 258 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 DCDC2CA8MYV0 355 aa14.77□□□□□ -0.04
MSH2-206ENST00000543555 EBAG9O00559 213 aa14.77□□□□□ -0.04
MSH2-206ENST00000543555 TFAMQ00059 246 aaKnown RBP14.77□□□□□ -0.04
MSH2-206ENST00000543555 KLF1Q13351 362 aaPredicted RBP14.77□□□□□ -0.04
MSH2-206ENST00000543555 TRPC3Q13507 836 aa14.77□□□□□ -0.04
MSH2-206ENST00000543555 SLC29A2Q14542 456 aa14.77□□□□□ -0.04
MSH2-206ENST00000543555 ZNF568Q3ZCX4 644 aa14.77□□□□□ -0.04
MSH2-206ENST00000543555 GPAT2Q6NUI2 795 aa14.77□□□□□ -0.04
MSH2-206ENST00000543555 SYDE1Q6ZW31 735 aaPredicted RBP14.77□□□□□ -0.04
MSH2-206ENST00000543555 CCDC50Q8IVM0 306 aa14.77□□□□□ -0.04
MSH2-206ENST00000543555 KATNAL2Q8IYT4 538 aa14.77□□□□□ -0.04
MSH2-206ENST00000543555 TLCD1Q96CP7 247 aa14.77□□□□□ -0.04
MSH2-206ENST00000543555 ZNF668Q96K58 619 aaPredicted RBP14.77□□□□□ -0.04
MSH2-206ENST00000543555 WHRNQ9P202 907 aa14.77□□□□□ -0.04
MSH2-206ENST00000543555 CCL15-CCL14A0A0B4J2E2 113 aa14.77□□□□□ -0.05
MSH2-206ENST00000543555 SRRM3A6NNA2 597 aaPredicted RBP14.77□□□□□ -0.05
MSH2-206ENST00000543555 INO80B-WBP1J3KQ70 363 aa14.77□□□□□ -0.05
MSH2-206ENST00000543555 HBP1O60381 514 aa14.77□□□□□ -0.05
MSH2-206ENST00000543555 CAND2O75155 1236 aa14.77□□□□□ -0.05
MSH2-206ENST00000543555 GJB6O95452 261 aa14.77□□□□□ -0.05
MSH2-206ENST00000543555 LSM8O95777 96 aaKnown RBP14.77□□□□□ -0.05
MSH2-206ENST00000543555 TMEM191BP0C7N4 346 aa14.77□□□□□ -0.05
MSH2-206ENST00000543555 RALAP11233 206 aa14.77□□□□□ -0.05
MSH2-206ENST00000543555 RARGP13631 454 aa14.77□□□□□ -0.05
MSH2-206ENST00000543555 CCL15Q16663 113 aa14.77□□□□□ -0.05
MSH2-206ENST00000543555 THNSL1Q8IYQ7 743 aa14.77□□□□□ -0.05
MSH2-206ENST00000543555 INO80BQ9C086 356 aaPredicted RBP14.77□□□□□ -0.05
MSH2-206ENST00000543555 USTQ9Y2C2 406 aa14.77□□□□□ -0.05
MSH2-206ENST00000543555 BRD2P25440 801 aaKnown RBP14.76□□□□□ -0.05
MSH2-206ENST00000543555 GRK7Q8WTQ7 553 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 PDGFCQ9NRA1 345 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 ASIC3Q9UHC3 531 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 IP6K2Q9UHH9 426 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 R3HDM2Q9Y2K5 976 aaKnown RBP14.76□□□□□ -0.05
MSH2-206ENST00000543555 LOC102724159A0A0B4J2E5 919 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 TP73O15350 636 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 B4GALT5O43286 388 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 B4GALT4O60513 344 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 CALB1P05937 261 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 FGFR4P22455 802 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 CLCN3P51790 818 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 PTK6Q13882 451 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 TTLL4Q14679 1199 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 PWP2Q15269 919 aaKnown RBP14.76□□□□□ -0.05
MSH2-206ENST00000543555 ZNF699Q32M78 642 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 ZNF394Q53GI3 561 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 EEF1DP3Q658K8 133 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 EFCAB12Q6NXP0 572 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 SAPCD2Q86UD0 394 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 CEP120Q8N960 986 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 EXD1Q8NHP7 514 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 ZBTB10Q96DT7 871 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 PTPN18Q99952 460 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 HEMGNQ9BXL5 484 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 XYLT2Q9H1B5 865 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 RIPK2O43353 540 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 GAS8O95995 478 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 SSR1P43307 286 aaKnown RBP14.76□□□□□ -0.05
MSH2-206ENST00000543555 RPL7AP62424 266 aaKnown RBP14.76□□□□□ -0.05
MSH2-206ENST00000543555 MBTD1Q05BQ5 628 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 UBAP2Q5T6F2 1119 aaKnown RBP14.76□□□□□ -0.05
MSH2-206ENST00000543555 ZNF784Q8NCA9 323 aaPredicted RBP14.76□□□□□ -0.05
MSH2-206ENST00000543555 TMEM35BQ8NCS4 154 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 BRI3BPQ8WY22 251 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 PGM2Q96G03 612 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 OSBPL8Q9BZF1 889 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 HOMER3Q9NSC5 361 aa14.76□□□□□ -0.05
MSH2-206ENST00000543555 FEZ2Q9UHY8 353 aaPredicted RBP14.76□□□□□ -0.05
MSH2-206ENST00000543555 TMEM191CA6NGB0 347 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 TNNC2P02585 160 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 WEE2P0C1S8 567 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 OSTNP61366 133 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 TMEM132AQ24JP5 1023 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 CDR2LQ86X02 465 aaPredicted RBP14.75□□□□□ -0.05
MSH2-206ENST00000543555 ATL2Q8NHH9 583 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 ANKRD36BP1Q96IX9 119 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 ZNF518BQ9C0D4 1074 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 TCRBV5S1A1TA0A578 114 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 BTBD19C9JJ37 291 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 ASAP2O43150 1006 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 ITIH2P19823 946 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 IVDP26440 423 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 GJC1P36383 396 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 ASPAP45381 313 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 SEC24CP53992 1094 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 BYSLQ13895 437 aaKnown RBP14.75□□□□□ -0.05
MSH2-206ENST00000543555 CCNG2Q16589 344 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 RHBDF2Q6PJF5 856 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 SCARA5Q6ZMJ2 495 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 SNF8Q96H20 258 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 MS4A4AQ96JQ5 239 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 CCDC114Q96M63 670 aa14.75□□□□□ -0.05
MSH2-206ENST00000543555 CDT1Q9H211 546 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms