RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 GABRDO14764 452 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 FSCN2O14926 492 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 PHACTR2O75167 634 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 TADA2AO75478 443 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 RB1P06400 928 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 CDH8P55286 799 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 ERVFC1P60507 584 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 NOP14P78316 857 aaKnown RBP11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 TRPC3Q13507 836 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 SYCP1Q15431 976 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 EXOC3L4Q17RC7 722 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 ZNF699Q32M78 642 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 WDR72Q3MJ13 1102 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 SPOUT1Q5T280 376 aaKnown RBP11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 PPP2R2DQ66LE6 453 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 PDCL2Q8N4E4 241 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 WHAMMQ8TF30 809 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 HERC2P3Q9BVR0 1158 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 TTYH3Q9C0H2 523 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 GPR88Q9GZN0 384 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 ZBP1Q9H171 429 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 AAASQ9NRG9 546 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 GCNT4Q9P109 453 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 PCDHB8Q9UN66 801 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 PCDHB12Q9Y5F1 795 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 PCDHGC5Q9Y5F6 944 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 TIMM13Q9Y5L4 95 aaPredicted RBP11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 SNX9Q9Y5X1 595 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 CYB561D2O14569 222 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 ADAM12O43184 909 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 OAZ2O95190 189 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 SERPINC1P01008 464 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 SOD2P04179 222 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 WEE2P0C1S8 567 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 IRS1P35568 1242 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 PPM1AP35813 382 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 RAP1GAPP47736 663 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 UBASH3AP57075 661 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 DSG1Q02413 1049 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 UBXN1Q04323 297 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 LRMPQ12912 555 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 UVSSAQ2YD98 709 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 SV2CQ496J9 727 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 KLHDC7AQ5VTJ3 777 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 FAM171A1Q5VUB5 890 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 WSCD1Q658N2 575 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 GBP6Q6ZN66 633 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 TOP6BLQ8N6T0 577 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 LNX1Q8TBB1 728 aaPredicted RBP11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 ARNTL2Q8WYA1 636 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 ZNF560Q96MR9 790 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 SAMD11Q96NU1 681 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 TWNKQ96RR1 684 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 ZNF576Q9H609 170 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 SLC28A3Q9HAS3 691 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 PLCB1Q9NQ66 1216 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 NXF1Q9UBU9 619 aaKnown RBP11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 HMGXB4Q9UGU5 601 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 LZTS1Q9Y250 596 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 RWDD3Q9Y3V2 267 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 ATG2AQ2TAZ0 1938 aa11.45□□□□□ -0.58
NPIPB3-210ENST00000542817 SF3B1O75533 1304 aaKnown RBP eCLIP11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 A0A1W2PQC6 194 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 SYN3O14994 580 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 TACC1O75410 805 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 CTSAP10619 480 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 TYMPP19971 482 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 WARSP23381 471 aaKnown RBP11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 PAX3P23760 479 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 LMO2P25791 158 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 INCA1Q0VD86 236 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 MYO1EQ12965 1108 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 CUL2Q13617 745 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 GRIN2CQ14957 1233 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 PTPN14Q15678 1187 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 CCDC142Q17RM4 750 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 ZNF667Q5HYK9 610 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 HABP4Q5JVS0 413 aaKnown RBP11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 VARS2Q5ST30 1063 aaKnown RBP11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 IQCEQ6IPM2 695 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 RRAGAQ7L523 313 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 VPS52Q8N1B4 723 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 FBXO22Q8NEZ5 403 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 ANKRD20A12PQ8NF67 263 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 OR10T2Q8NGX3 314 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 GDPD5Q8WTR4 605 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 POF1BQ8WVV4 589 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 AUTS2Q8WXX7 1259 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 TMEM169Q96HH4 297 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 FAXDC2Q96IV6 333 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 PKMYT1Q99640 499 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 LSM14BQ9BX40 385 aaKnown RBP11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 NIF3L1Q9GZT8 377 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 APEX2Q9UBZ4 518 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 CNTN6Q9UQ52 1028 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 FHOD1Q9Y613 1164 aa11.44□□□□□ -0.58
NPIPB3-210ENST00000542817 CARNS1A5YM72 827 aa11.43□□□□□ -0.58
NPIPB3-210ENST00000542817 HIDE1A8MVS5 230 aa11.43□□□□□ -0.58
NPIPB3-210ENST00000542817 VNN2O95498 520 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms