RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 CCHCR1Q8TD31 782 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 EPS8L3Q8TE67 593 aaKnown RBP6.95□□□□□ -1.3
PTPRO-208ENST00000542557 ZNF606Q8WXB4 792 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 ATG4AQ8WYN0 398 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 CHMP6Q96FZ7 201 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 RBM41Q96IZ5 413 aaKnown RBP6.95□□□□□ -1.3
PTPRO-208ENST00000542557 SERPINB12Q96P63 405 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 MPHOSPH6Q99547 160 aaKnown RBP6.95□□□□□ -1.3
PTPRO-208ENST00000542557 SGIP1Q9BQI5 828 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 FOXP3Q9BZS1 431 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 NIF3L1Q9GZT8 377 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 RNF39Q9H2S5 420 aa6.95□□□□□ -1.3
PTPRO-208ENST00000542557 DDX20Q9UHI6 824 aaKnown RBP6.95□□□□□ -1.3
PTPRO-208ENST00000542557 TLR3O15455 904 aaKnown RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 CHN1P15882 459 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 DRD4P21917 467 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 PROZP22891 400 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 ITGA8P53708 1063 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 HIRAP54198 1017 aaPredicted RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 COPS2P61201 443 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 LMNB2Q03252 620 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 SNX1Q13596 522 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 UBAP2Q5T6F2 1119 aaKnown RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 GKAP1Q5VSY0 366 aaPredicted RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 LLGL2Q6P1M3 1020 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 PLPPR4Q7Z2D5 763 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 PASD1Q8IV76 773 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 CCDC50Q8IVM0 306 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 CACNA2D3Q8IZS8 1091 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 PRPF31Q8WWY3 499 aaKnown RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 FAXDC2Q96IV6 333 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 ZNF317Q96PQ6 595 aaPredicted RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 ACO2Q99798 780 aaKnown RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 JPH2Q9BR39 696 aaPredicted RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 CPSF3Q9UKF6 684 aaKnown RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 PCDHGC3Q9UN70 934 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 R3HDM2Q9Y2K5 976 aaKnown RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 TLDC2A0PJX2 215 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 TMEM191CA6NGB0 347 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 TTC4O95801 387 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 SLC25A27O95847 323 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 PRKCBP05771 671 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 TMEM191BP0C7N4 346 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 LIG3P49916 1009 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 QPCTQ16769 361 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 DUOXA2Q1HG44 320 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 SGSM1Q2NKQ1 1148 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 C2CD6Q53TS8 623 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 PACS2Q86VP3 889 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 RCOR2Q8IZ40 523 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 MICALL1Q8N3F8 863 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 NIPA2Q8N8Q9 360 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 TMEM35BQ8NCS4 154 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 SEC16BQ96JE7 1060 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 CCDC114Q96M63 670 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 SCLT1Q96NL6 688 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 SELENOSQ9BQE4 189 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 ACTR5Q9H9F9 607 aaPredicted RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 ZSWIM8A7E2V4 1837 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 A0A0G2JLL6 359 aaPredicted RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 O00370 1275 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 NDC80O14777 642 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 ASAP2O43150 1006 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 EIF4BP23588 611 aaKnown RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 KLRC2P26717 231 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 CHKAP35790 457 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 TNFSF9P41273 254 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 SLC26A2P50443 739 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 YWHAEP62258 255 aaKnown RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 IFI35P80217 286 aaPredicted RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 LAMTOR4Q0VGL1 99 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 NFX1Q12986 1120 aaKnown RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 MAPK6Q16659 721 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 PPP1R15BQ5SWA1 713 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 MPZL3Q6UWV2 235 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 TSHZ1Q6ZSZ6 1077 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 ZNF365Q70YC5 407 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 PRRT2Q7Z6L0 340 aaPredicted RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 PHLDB2Q86SQ0 1253 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 CCDC25Q86WR0 208 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 NCAPG2Q86XI2 1143 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 MDM1Q8TC05 714 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 GPR20Q99678 358 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 MTMR12Q9C0I1 747 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 INTS9Q9NV88 658 aaKnown RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 PPP1R1BQ9UD71 204 aaPredicted RBP6.94□□□□□ -1.3
PTPRO-208ENST00000542557 ANAPC5Q9UJX4 755 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 CSADQ9Y600 493 aa6.94□□□□□ -1.3
PTPRO-208ENST00000542557 TTLL13PA6NNM8 815 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 ZBTB42B2RXF5 422 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 B4GALT4O60513 344 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 CNMDO75829 334 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 CST3P01034 146 aaPredicted RBP6.93□□□□□ -1.3
PTPRO-208ENST00000542557 ABHD2P08910 425 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 HOXC6P09630 235 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 HARSP12081 509 aaKnown RBP6.93□□□□□ -1.3
PTPRO-208ENST00000542557 ADCY8P40145 1251 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 GSCP56915 257 aaPredicted RBP6.93□□□□□ -1.3
PTPRO-208ENST00000542557 ZNF252P-AS1Q0IIN9 211 aa6.93□□□□□ -1.3
PTPRO-208ENST00000542557 IFT88Q13099 833 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms