RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 GAREM2Q75VX8 874 aa10.73□□□□□ -0.69
CHFR-220ENST00000541817 LPCAT2Q7L5N7 544 aa10.73□□□□□ -0.69
CHFR-220ENST00000541817 SYT12Q8IV01 421 aa10.73□□□□□ -0.69
CHFR-220ENST00000541817 CCDC33Q8N5R6 958 aa10.73□□□□□ -0.69
CHFR-220ENST00000541817 MDGA1Q8NFP4 955 aa10.73□□□□□ -0.69
CHFR-220ENST00000541817 TMEM87BQ96K49 555 aa10.73□□□□□ -0.69
CHFR-220ENST00000541817 PGLYRP2Q96PD5 576 aa10.73□□□□□ -0.69
CHFR-220ENST00000541817 FNBP1Q96RU3 617 aa10.73□□□□□ -0.69
CHFR-220ENST00000541817 MTRQ99707 1265 aa10.73□□□□□ -0.69
CHFR-220ENST00000541817 DNAJC25Q9H1X3 360 aa10.73□□□□□ -0.69
CHFR-220ENST00000541817 CRISPLD1Q9H336 500 aa10.73□□□□□ -0.69
CHFR-220ENST00000541817 XPNPEP1Q9NQW7 623 aa10.73□□□□□ -0.69
CHFR-220ENST00000541817 CEP192Q8TEP8 1941 aa10.73□□□□□ -0.69
CHFR-220ENST00000541817 MYO18BQ8IUG5 2567 aa10.73□□□□□ -0.69
CHFR-220ENST00000541817 ZNF462Q96JM2 2506 aa10.73□□□□□ -0.69
CHFR-220ENST00000541817 HELZP42694 1942 aaKnown RBP10.72□□□□□ -0.69
CHFR-220ENST00000541817 FAM149AA5PLN7 773 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 GOLGA8CPA6NN73 597 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 VNN2O95498 520 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 OR4Q2P0C623 313 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 CDC27P30260 824 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 RFC5P40937 340 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 QARSP47897 775 aaKnown RBP10.72□□□□□ -0.69
CHFR-220ENST00000541817 MCM2P49736 904 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 CFHR1Q03591 330 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 SOX4Q06945 474 aaPredicted RBP10.72□□□□□ -0.69
CHFR-220ENST00000541817 SRSF1Q07955 248 aaKnown RBP eCLIP10.72□□□□□ -0.694e-6■□□□□ 8.1
CHFR-220ENST00000541817 RTN1Q16799 776 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 UPP1Q16831 310 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 SKOR2Q2VWA4 1001 aaPredicted RBP10.72□□□□□ -0.69
CHFR-220ENST00000541817 CTXN3Q4LDR2 81 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 TOGARAM2Q6ZUX3 1019 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 ARID3AQ99856 593 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 P2RY13Q9BPV8 354 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 ZMYND12Q9H0C1 365 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 PRORYQ9H606 182 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 C6orf50Q9HD87 102 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 BRPF3Q9ULD4 1205 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 SLC27A5Q9Y2P5 690 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 YIPF1Q9Y548 306 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 ZMYM2Q9UBW7 1377 aa10.72□□□□□ -0.69
CHFR-220ENST00000541817 GOLGA6L22H0YM25 854 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 TMEM189-UBE2V1I3L0A0 370 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 TRAK2O60296 914 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 HNRNPLP14866 589 aaKnown RBP eCLIP10.71□□□□□ -0.69
CHFR-220ENST00000541817 CPB1P15086 417 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 LIG1P18858 919 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 DRD1P21728 446 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 GABRR2P28476 465 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 DDIT3P35638 169 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 PLCB2Q00722 1185 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 KCNC4Q03721 635 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 GFPT1Q06210 699 aaPredicted RBP10.71□□□□□ -0.69
CHFR-220ENST00000541817 TFDP1Q14186 410 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 CTTNQ14247 550 aaKnown RBP10.71□□□□□ -0.69
CHFR-220ENST00000541817 PTPAQ15257 358 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 PFKFB3Q16875 520 aaPredicted RBP10.71□□□□□ -0.69
CHFR-220ENST00000541817 TMEM132AQ24JP5 1023 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 C2orf27AQ580R0 203 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 TPGS2Q68CL5 300 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 APOA5Q6Q788 366 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 PCSK4Q6UW60 755 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 SYNE3Q6ZMZ3 975 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 MAEAQ7L5Y9 396 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 IFNLR1Q8IU57 520 aaPredicted RBP10.71□□□□□ -0.69
CHFR-220ENST00000541817 SCUBE3Q8IX30 993 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 TMEM130Q8N3G9 435 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 LEMD2Q8NC56 503 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 TTC16Q8NEE8 873 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 RIN3Q8TB24 985 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 TCEANC2Q96MN5 208 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 PCDH15Q96QU1 1955 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 FAM83CQ9BQN1 747 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 POLMQ9NP87 494 aaPredicted RBP10.71□□□□□ -0.69
CHFR-220ENST00000541817 RBM28Q9NW13 759 aaKnown RBP10.71□□□□□ -0.69
CHFR-220ENST00000541817 THG1LQ9NWX6 298 aaKnown RBP10.71□□□□□ -0.69
CHFR-220ENST00000541817 RGL1Q9NZL6 768 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 AFF4Q9UHB7 1163 aaKnown RBP10.71□□□□□ -0.69
CHFR-220ENST00000541817 PILRBQ9UKJ0 227 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 SLC6A14Q9UN76 642 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 CCL26Q9Y258 94 aa10.71□□□□□ -0.69
CHFR-220ENST00000541817 RBM8AQ9Y5S9 174 aaKnown RBP10.71□□□□□ -0.69
CHFR-220ENST00000541817 CFAP46Q8IYW2 2715 aa10.7□□□□□ -0.7
CHFR-220ENST00000541817 A0A087WWV3 80 aa10.7□□□□□ -0.7
CHFR-220ENST00000541817 H7C4K7 107 aa10.7□□□□□ -0.7
CHFR-220ENST00000541817 hCG_1984214I3L0E3 225 aa10.7□□□□□ -0.7
CHFR-220ENST00000541817 TNFRSF10BO14763 440 aa10.7□□□□□ -0.7
CHFR-220ENST00000541817 TRAPPC3O43617 180 aa10.7□□□□□ -0.7
CHFR-220ENST00000541817 EDN1P05305 212 aa10.7□□□□□ -0.7
CHFR-220ENST00000541817 KRT10P13645 584 aa10.7□□□□□ -0.7
CHFR-220ENST00000541817 GLRA2P23416 452 aa10.7□□□□□ -0.7
CHFR-220ENST00000541817 YWHABP31946 246 aaKnown RBP10.7□□□□□ -0.7
CHFR-220ENST00000541817 GJA4P35212 333 aa10.7□□□□□ -0.7
CHFR-220ENST00000541817 EIF2S3P41091 472 aaKnown RBP10.7□□□□□ -0.7
CHFR-220ENST00000541817 NUCB2P80303 420 aa10.7□□□□□ -0.7
CHFR-220ENST00000541817 DUSP4Q13115 394 aa10.7□□□□□ -0.7
CHFR-220ENST00000541817 MRPL58Q14197 206 aaKnown RBP10.7□□□□□ -0.7
CHFR-220ENST00000541817 MXD4Q14582 209 aaPredicted RBP10.7□□□□□ -0.7
CHFR-220ENST00000541817 LYSMD4Q5XG99 296 aa10.7□□□□□ -0.7
CHFR-220ENST00000541817 EEF1DP3Q658K8 133 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms