RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 CCDC170Q8IYT3 715 aa9.07□□□□□ -0.96
CHD4-208ENST00000540960 SYCP3Q8IZU3 236 aa9.07□□□□□ -0.96
CHD4-208ENST00000540960 CCAR2Q8N163 923 aaKnown RBP9.07□□□□□ -0.96
CHD4-208ENST00000540960 EHBP1Q8NDI1 1231 aa9.07□□□□□ -0.96
CHD4-208ENST00000540960 KIF18AQ8NI77 898 aa9.07□□□□□ -0.96
CHD4-208ENST00000540960 SCFD1Q8WVM8 642 aa9.07□□□□□ -0.96
CHD4-208ENST00000540960 SPIRE2Q8WWL2 714 aa9.07□□□□□ -0.96
CHD4-208ENST00000540960 SYN2Q92777 582 aaPredicted RBP9.07□□□□□ -0.96
CHD4-208ENST00000540960 ZFP91Q96JP5 570 aaPredicted RBP9.07□□□□□ -0.96
CHD4-208ENST00000540960 IFT74Q96LB3 600 aa9.07□□□□□ -0.96
CHD4-208ENST00000540960 ZNF830Q96NB3 372 aaPredicted RBP9.07□□□□□ -0.96
CHD4-208ENST00000540960 ACCSQ96QU6 501 aa9.07□□□□□ -0.96
CHD4-208ENST00000540960 FTHL17Q9BXU8 183 aa9.07□□□□□ -0.96
CHD4-208ENST00000540960 GBP3Q9H0R5 595 aa9.07□□□□□ -0.96
CHD4-208ENST00000540960 MSRB2Q9Y3D2 182 aa9.07□□□□□ -0.96
CHD4-208ENST00000540960 NEUROG3Q9Y4Z2 214 aa9.07□□□□□ -0.96
CHD4-208ENST00000540960 PCDHA2Q9Y5H9 948 aa9.07□□□□□ -0.96
CHD4-208ENST00000540960 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.07□□□□□ -0.96
CHD4-208ENST00000540960 GTPBP10A4D1E9 387 aaKnown RBP9.06□□□□□ -0.96
CHD4-208ENST00000540960 NT5C1B-RDH14C9J2C7 533 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 PYCARD-AS1I3L0S3 204 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 GNAT1P11488 350 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 LAMP2P13473 410 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 FECHP22830 423 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 ANXA13P27216 316 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 CYLC1P35663 651 aaPredicted RBP9.06□□□□□ -0.96
CHD4-208ENST00000540960 RARRES1P49788 294 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 NRLP54845 237 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 TMEM62Q0P6H9 643 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 DMP1Q13316 513 aaPredicted RBP9.06□□□□□ -0.96
CHD4-208ENST00000540960 ITGB3BPQ13352 177 aaPredicted RBP9.06□□□□□ -0.96
CHD4-208ENST00000540960 XKR9Q5GH70 373 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 TCEAL6Q6IPX3 200 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 ZNF720Q7Z2F6 126 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 SFR1Q86XK3 245 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 IRF2BP1Q8IU81 584 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 NEK11Q8NG66 645 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 PIGOQ8TEQ8 1089 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 LRRC15Q8TF66 581 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 GLG1Q92896 1179 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 FGF14Q92915 247 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 TCEAL3Q969E4 200 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 NXPE3Q969Y0 559 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 KCTD10Q9H3F6 313 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 AZI2Q9H6S1 392 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 WDR6Q9NNW5 1121 aaKnown RBP9.06□□□□□ -0.96
CHD4-208ENST00000540960 SPG21Q9NZD8 308 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 MYO6Q9UM54 1294 aa9.06□□□□□ -0.96
CHD4-208ENST00000540960 BZW2Q9Y6E2 419 aaKnown RBP9.06□□□□□ -0.96
CHD4-208ENST00000540960 ACACAQ13085 2346 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 SPDYE4A6NLX3 237 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 C4orf47A7E2U8 309 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 DDX39AO00148 427 aaKnown RBP9.05□□□□□ -0.96
CHD4-208ENST00000540960 BACH1O14867 736 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 NR3C1P04150 777 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 KRT13P13646 458 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 KCNA2P16389 499 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 UBA1P22314 1058 aaKnown RBP9.05□□□□□ -0.96
CHD4-208ENST00000540960 NR2F2P24468 414 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 KRT9P35527 623 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 MAGEA9P43362 315 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 RPS9P46781 194 aaKnown RBP9.05□□□□□ -0.96
CHD4-208ENST00000540960 ACTR2P61160 394 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 MRPS6P82932 125 aaKnown RBP9.05□□□□□ -0.96
CHD4-208ENST00000540960 PRKCQQ04759 706 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 ADCY1Q08828 1119 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 LRMPQ12912 555 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 ARID5BQ14865 1188 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 MARCH8Q5T0T0 291 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 RNF43Q68DV7 783 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 PARM1Q6UWI2 310 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 METTL7BQ6UX53 244 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 TMEM173Q86WV6 379 aaPredicted RBP9.05□□□□□ -0.96
CHD4-208ENST00000540960 C12orf56Q8IXR9 622 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 VPS52Q8N1B4 723 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 SLC39A11Q8N1S5 342 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 TC2NQ8N9U0 490 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 IL31RAQ8NI17 732 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 SEPT1Q8WYJ6 367 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 KCNN1Q92952 543 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 GJA10Q969M2 543 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 FAM81BQ96LP2 452 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 ZNF558Q96NG5 402 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 CASD1Q96PB1 797 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 KLHL5Q96PQ7 755 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 DNAJC7Q99615 494 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 NTPCRQ9BSD7 190 aaKnown RBP9.05□□□□□ -0.96
CHD4-208ENST00000540960 RUSC1Q9BVN2 902 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 ZBP1Q9H171 429 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 KIAA1586Q9HCI6 787 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 RNF19AQ9NV58 838 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 INTS13Q9NVM9 706 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 MYO1AQ9UBC5 1043 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 PYCARDQ9ULZ3 195 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 APC2O95996 2303 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 CLUHO75153 1309 aa9.05□□□□□ -0.96
CHD4-208ENST00000540960 PCNX2A6NKB5 2137 aa9.04□□□□□ -0.96
CHD4-208ENST00000540960 TRIM49BA6NDI0 452 aa9.04□□□□□ -0.96
CHD4-208ENST00000540960 J3QKU1 62 aa9.04□□□□□ -0.96
CHD4-208ENST00000540960 P4HA2O15460 535 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms