RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 ZDHHC7Q9NXF8 308 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 SIX4Q9UIU6 781 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 FBXW11Q9UKB1 542 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 DSEQ9UL01 958 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 TRAF3IP3Q9Y228 551 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 TRIP11Q15643 1979 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 ARHGEF37A1IGU5 675 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 WDR27A2RRH5 827 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 BIN1O00499 593 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 PRRG1O14668 218 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 ZMYND10O75800 440 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 CYP11A1P05108 521 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 OR4Q2P0C623 313 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 CPB1P15086 417 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 TYMPP19971 482 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 RPL13P26373 211 aaKnown RBP9.94□□□□□ -0.82
SNHG1-215ENST00000540904 ELF1P32519 619 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 ADCY1Q08828 1119 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 MYO1EQ12965 1108 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 MYBPC2Q14324 1141 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 CAMK4Q16566 473 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 PPM1LQ5SGD2 360 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 WSCD1Q658N2 575 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 C15orf39Q6ZRI6 1047 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 TRAPPC11Q7Z392 1133 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 METTL23Q86XA0 190 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 LRRC52Q8N7C0 313 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 CMASQ8NFW8 434 aaPredicted RBP9.94□□□□□ -0.82
SNHG1-215ENST00000540904 CXorf38Q8TB03 319 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 PLEKHO2Q8TD55 490 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 TMEM174Q8WUU8 243 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 SMG7Q92540 1137 aaKnown RBP9.94□□□□□ -0.82
SNHG1-215ENST00000540904 ZNF516Q92618 1163 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 EEF2KMTQ96G04 330 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 BORCS6Q96GS4 357 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 HPDLQ96IR7 371 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 PRKD2Q9BZL6 878 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 GZF1Q9H116 711 aaPredicted RBP9.94□□□□□ -0.82
SNHG1-215ENST00000540904 MAN1B1Q9UKM7 699 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 SNX9Q9Y5X1 595 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 VCANP13611 3396 aa9.94□□□□□ -0.82
SNHG1-215ENST00000540904 TCF20Q9UGU0 1960 aaKnown RBP9.94□□□□□ -0.82
SNHG1-215ENST00000540904 OR6C75A6NL08 312 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 LRRIQ3A6PVS8 624 aaPredicted RBP9.93□□□□□ -0.82
SNHG1-215ENST00000540904 CCL16O15467 120 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 PHACTR2O75167 634 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 AKAP3O75969 853 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 ABLIM3O94929 683 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 CST3P01034 146 aaPredicted RBP9.93□□□□□ -0.82
SNHG1-215ENST00000540904 HNRNPA1P09651 372 aaKnown RBP eCLIP9.93□□□□□ -0.82
SNHG1-215ENST00000540904 ATF2P15336 505 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 CDR1P51861 262 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 DLG4P78352 724 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 ADAM9Q13443 819 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 TRPC3Q13507 836 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 NFIL3Q16649 462 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 EDRF1Q3B7T1 1238 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 ZCWPW2Q504Y3 356 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 TPGS2Q68CL5 300 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 CYP26C1Q6V0L0 522 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 RNF19BQ6ZMZ0 732 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 CLEC17AQ6ZS10 378 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 CCDC149Q6ZUS6 474 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 FAM186BQ8IYM0 893 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 THEM5Q8N1Q8 247 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 PDCL2Q8N4E4 241 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 OR10T2Q8NGX3 314 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 PARD3BQ8TEW8 1205 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 ZNF707Q96C28 371 aaPredicted RBP9.93□□□□□ -0.82
SNHG1-215ENST00000540904 PGLYRP2Q96PD5 576 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 TMEM209Q96SK2 561 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 OXCT2Q9BYC2 517 aaPredicted RBP9.93□□□□□ -0.82
SNHG1-215ENST00000540904 GTPBP4Q9BZE4 634 aaKnown RBP9.93□□□□□ -0.82
SNHG1-215ENST00000540904 CYP4F11Q9HBI6 524 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 GDAP2Q9NXN4 497 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 AFF4Q9UHB7 1163 aaKnown RBP9.93□□□□□ -0.82
SNHG1-215ENST00000540904 POLIQ9UNA4 740 aa9.93□□□□□ -0.82
SNHG1-215ENST00000540904 SPTBN5Q9NRC6 3674 aaKnown RBP9.93□□□□□ -0.82
SNHG1-215ENST00000540904 VWA8A3KMH1 1905 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 PDCD11Q14690 1871 aaKnown RBP9.92□□□□□ -0.82
SNHG1-215ENST00000540904 LOC730098B7Z3J9 87 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 PSMA7O14818 248 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 HUS1O60921 280 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 XYLBO75191 536 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 CLSTN1O94985 981 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 SEC24AO95486 1093 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 KRT13P13646 458 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 HOXA9P31269 272 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 PSMC2P35998 433 aaKnown RBP9.92□□□□□ -0.82
SNHG1-215ENST00000540904 VAMP7P51809 220 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 PMS1P54277 932 aaKnown RBP9.92□□□□□ -0.82
SNHG1-215ENST00000540904 BIRC3Q13489 604 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 STIM1Q13586 685 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 UVSSAQ2YD98 709 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 COBLL1Q53SF7 1204 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 TDRD10Q5VZ19 366 aaKnown RBP9.92□□□□□ -0.82
SNHG1-215ENST00000540904 ANKRD40Q6AI12 368 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 CENPPQ6IPU0 288 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 KLHL10Q6JEL2 608 aa9.92□□□□□ -0.82
SNHG1-215ENST00000540904 GRASPQ7Z6J2 395 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms