RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 GRIK5Q16478 980 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 P3H1Q32P28 736 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 CERS5Q8N5B7 392 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 CYP2W1Q8TAV3 490 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 PITPNM3Q9BZ71 974 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 ZFATQ9P243 1243 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 SNX12Q9UMY4 172 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 CSDE1O75534 798 aaKnown RBP14.81□□□□□ -0.04
USP3-204ENST00000540797 APRTP07741 180 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 CASP4P49662 377 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 GTF2H3Q13889 308 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 NCAPHQ15003 741 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 SYCP2LQ5T4T6 812 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 ZNF720Q7Z2F6 126 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 ADGRF2Q8IZF7 708 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 A1CFQ9NQ94 594 aaKnown RBP14.81□□□□□ -0.04
USP3-204ENST00000540797 CAMTA1Q9Y6Y1 1673 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 A0A1B0GUA9 196 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 HADHAP40939 763 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 SOX10P56693 466 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 ORC1Q13415 861 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 PDK1Q15118 436 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 SYDE1Q6ZW31 735 aaPredicted RBP14.81□□□□□ -0.04
USP3-204ENST00000540797 NIPA1Q7RTP0 329 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 RSAD1Q9HA92 442 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 KBTBD4Q9NVX7 518 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 RHBDL3P58872 404 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 ATP6V0D2Q8N8Y2 350 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 PDZD8Q8NEN9 1154 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 SPATA4Q8NEY3 305 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 ANKS1AQ92625 1134 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 ARHGEF26Q96DR7 871 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 ERGIC2Q96RQ1 377 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 TRIM55Q9BYV6 548 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 RAB6BQ9NRW1 208 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 SYNPO2Q9UMS6 1093 aa14.81□□□□□ -0.04
USP3-204ENST00000540797 IRF6O14896 467 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 ARHGEF7Q14155 803 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 CATSPERGQ6ZRH7 1159 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 SZRD1Q7Z422 152 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 PDCD7Q8N8D1 485 aaKnown RBP14.8□□□□□ -0.04
USP3-204ENST00000540797 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.8□□□□□ -0.04
USP3-204ENST00000540797 DSEQ9UL01 958 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 KIAA1257Q9ULG3 409 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 CFAP69A5D8W1 941 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 TMEM247A6NEH6 219 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 COMTP21964 271 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 LIG3P49916 1009 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 TMEM132BQ14DG7 1078 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 FSCN1Q16658 493 aaKnown RBP14.8□□□□□ -0.04
USP3-204ENST00000540797 HASPINQ8TF76 798 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 RNF208Q9H0X6 261 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 TMEM39AQ9NV64 488 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 A0A0G2JND7 137 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 FAM86B1E9PN63 330 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 TMCC1O94876 653 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 MMEP08473 750 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 FAM86B2P0C5J1 330 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 VDRP11473 427 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 IQSEC1Q6DN90 963 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 FBXO38Q6PIJ6 1188 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 TBC1D1Q86TI0 1168 aaPredicted RBP14.8□□□□□ -0.04
USP3-204ENST00000540797 ANKMY2Q8IV38 441 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 ATXN7L3BQ96GX2 97 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 EFHD1Q9BUP0 239 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 SLC13A1Q9BZW2 595 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 USH1CQ9Y6N9 552 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 EGFRP00533 1210 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 SLC2A3P11169 496 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 ESRRAP11474 423 aaPredicted RBP14.8□□□□□ -0.04
USP3-204ENST00000540797 ADCYAP1R1P41586 468 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 SMTNL2Q2TAL5 461 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 FASTKD1Q53R41 847 aaKnown RBP14.8□□□□□ -0.04
USP3-204ENST00000540797 FAM133BQ5BKY9 247 aaKnown RBP14.8□□□□□ -0.04
USP3-204ENST00000540797 TAF2Q6P1X5 1199 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 MRPS31Q92665 395 aaKnown RBP14.8□□□□□ -0.04
USP3-204ENST00000540797 SYN2Q92777 582 aaPredicted RBP14.8□□□□□ -0.04
USP3-204ENST00000540797 SPDL1Q96EA4 605 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 CLMNQ96JQ2 1002 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 DDIT4Q9NX09 232 aa14.8□□□□□ -0.04
USP3-204ENST00000540797 SLC11A2P49281 568 aa14.79□□□□□ -0.04
USP3-204ENST00000540797 PSEN2P49810 448 aa14.79□□□□□ -0.04
USP3-204ENST00000540797 TWF1Q12792 350 aa14.79□□□□□ -0.04
USP3-204ENST00000540797 ACAD11Q709F0 780 aa14.79□□□□□ -0.04
USP3-204ENST00000540797 RAB42Q8N4Z0 105 aa14.79□□□□□ -0.04
USP3-204ENST00000540797 FBXO32Q969P5 355 aa14.79□□□□□ -0.04
USP3-204ENST00000540797 OSBPL8Q9BZF1 889 aa14.79□□□□□ -0.04
USP3-204ENST00000540797 ALDH2P05091 517 aa14.79□□□□□ -0.04
USP3-204ENST00000540797 CHADLQ6NUI6 762 aa14.79□□□□□ -0.04
USP3-204ENST00000540797 TRIM65Q6PJ69 517 aa14.79□□□□□ -0.04
USP3-204ENST00000540797 TMC2Q8TDI7 906 aa14.79□□□□□ -0.04
USP3-204ENST00000540797 RANBP17Q9H2T7 1088 aaKnown RBP14.79□□□□□ -0.04
USP3-204ENST00000540797 TXLNGQ9NUQ3 528 aa14.79□□□□□ -0.04
USP3-204ENST00000540797 TTC36A6NLP5 189 aa14.79□□□□□ -0.04
USP3-204ENST00000540797 PHF2O75151 1096 aa14.79□□□□□ -0.04
USP3-204ENST00000540797 GYPCP04921 128 aa14.79□□□□□ -0.04
USP3-204ENST00000540797 AKT1P31749 480 aa14.79□□□□□ -0.04
USP3-204ENST00000540797 RPL10AP62906 217 aaKnown RBP14.79□□□□□ -0.04
USP3-204ENST00000540797 PCSK7Q16549 785 aa14.79□□□□□ -0.04
USP3-204ENST00000540797 DEFB115Q30KQ5 88 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms