RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 P3H1Q32P28 736 aa18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 IZUMO3Q5VZ72 239 aa18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 CHADLQ6NUI6 762 aa18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 CCDC121Q6ZUS5 278 aa18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 NIF3L1Q9GZT8 377 aa18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 CDC42EP4Q9H3Q1 356 aaKnown RBP18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 MINDY3Q9H8M7 445 aa18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 EFNA5P52803 228 aa18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 GPS1Q13098 491 aa18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 CCDC33Q8N5R6 958 aa18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 MYCBPAPQ8TBZ2 947 aa18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 IPO4Q8TEX9 1081 aaKnown RBP18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 TCP11Q8WWU5 503 aa18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 CDCA5Q96FF9 252 aa18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 FEZ2Q9UHY8 353 aaPredicted RBP18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 DOCK5Q9H7D0 1870 aa18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 UNGP13051 313 aaPredicted RBP18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 ATP11AP98196 1134 aa18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 MAP1SQ66K74 1059 aaPredicted RBP18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 ZDHHC24Q6UX98 284 aa18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 MFSD7Q6UXD7 560 aa18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 SRRM1Q8IYB3 904 aaKnown RBP18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 FAM167AQ96KS9 214 aa18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 AGAP1Q9UPQ3 857 aa18.1■□□□□ 0.49
EPB41L3-204ENST00000540638 GMNCA6NCL1 334 aa18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 GRIN3BO60391 1043 aa18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 PTGIRP43119 386 aa18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 TXNRD3NBQ6F5E7 133 aa18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 LRRN4Q8WUT4 740 aa18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 SAYSD1Q9NPB0 183 aa18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 PDLIM7Q9NR12 457 aa18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 SCINQ9Y6U3 715 aa18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 VGLL3A8MV65 326 aa18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 M0QYV0 167 aa18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 MAFO75444 373 aaPredicted RBP18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 NFICP08651 508 aa18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 ADCYAP1R1P41586 468 aa18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 MXD4Q14582 209 aaPredicted RBP18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 TMED2Q15363 201 aa18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 LRIG3Q6UXM1 1119 aa18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 BRSK2Q8IWQ3 736 aa18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 RAPGEF5Q92565 580 aa18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 GPR20Q99678 358 aa18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 PRMT1Q99873 361 aaKnown RBP18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 TRIM6Q9C030 488 aaPredicted RBP18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 GRHL1Q9NZI5 618 aa18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 MYH9P35579 1960 aaKnown RBP18.09■□□□□ 0.49
EPB41L3-204ENST00000540638 SYNJ2BP-COX16A0A087WUM0 186 aa18.08■□□□□ 0.49
EPB41L3-204ENST00000540638 ARSEP51690 589 aa18.08■□□□□ 0.49
EPB41L3-204ENST00000540638 POU5F1Q01860 360 aaKnown RBP18.08■□□□□ 0.49
EPB41L3-204ENST00000540638 KIZQ2M2Z5 673 aa18.08■□□□□ 0.49
EPB41L3-204ENST00000540638 OR6B2Q6IFH4 312 aa18.08■□□□□ 0.49
EPB41L3-204ENST00000540638 MICALCLQ6ZW33 695 aa18.08■□□□□ 0.49
EPB41L3-204ENST00000540638 TFAP2BQ92481 460 aa18.08■□□□□ 0.49
EPB41L3-204ENST00000540638 TMEM121Q9BTD3 319 aa18.08■□□□□ 0.49
EPB41L3-204ENST00000540638 COX16Q9P0S2 106 aa18.08■□□□□ 0.49
EPB41L3-204ENST00000540638 RBPJLQ9UBG7 517 aa18.08■□□□□ 0.49
EPB41L3-204ENST00000540638 ADAMTS5Q9UNA0 930 aa18.08■□□□□ 0.49
EPB41L3-204ENST00000540638 F5H423 210 aaPredicted RBP18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 NEFHP12036 1026 aa18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 ADCY2Q08462 1091 aa18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 NFX1Q12986 1120 aaKnown RBP18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 SLMAPQ14BN4 828 aa18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 SGSM1Q2NKQ1 1148 aa18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 ANKMY2Q8IV38 441 aa18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 ATL2Q8NHH9 583 aa18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 FAM81BQ96LP2 452 aa18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 ACO2Q99798 780 aaKnown RBP18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 ELAC2Q9BQ52 826 aaKnown RBP18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 FAM49BQ9NUQ9 324 aa18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 ZC3H11AO75152 810 aaKnown RBP eCLIP18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 KRT3P12035 628 aa18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 KRT15P19012 456 aa18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 POLR2BP30876 1174 aaKnown RBP18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 YARSP54577 528 aaKnown RBP18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 GHRHRQ02643 423 aa18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 GPR162Q16538 588 aa18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 TTC31Q49AM3 519 aaPredicted RBP18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 MORC4Q8TE76 937 aa18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 GRK7Q8WTQ7 553 aa18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 ARHGEF2Q92974 986 aaKnown RBP18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 SNF8Q96H20 258 aa18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 SMARCAD1Q9H4L7 1026 aa18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 DNPEPQ9ULA0 475 aa18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 HES2Q9Y543 173 aa18.08■□□□□ 0.48
EPB41L3-204ENST00000540638 ZBTB48P10074 688 aaPredicted RBP18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 SMAD1Q15797 465 aaKnown RBP18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 CELF3Q5SZQ8 465 aaKnown RBP18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 FBXW10Q5XX13 1052 aa18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 DENND1BQ6P3S1 775 aa18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 ZC3H18Q86VM9 953 aaKnown RBP18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 RFX6Q8HWS3 928 aa18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 CCDC89Q8N998 374 aa18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 SMYD3Q9H7B4 428 aa18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 NGRNQ9NPE2 291 aaKnown RBP18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 ZDHHC18Q9NUE0 388 aa18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 CREB1P16220 341 aa18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 EIF3BP55884 814 aaKnown RBP18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 RTP1P59025 263 aa18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 EFCAB13Q8IY85 973 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms