RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 LACTBL1A8MY62 500 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 HNRNPDLO14979 420 aaKnown RBP13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 FGF19O95750 216 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 OR4Q2P0C623 313 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 CHRNB1P11230 501 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 ODC1P11926 461 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 TNFSF9P41273 254 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 ZNF131P52739 623 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 LMNB2Q03252 620 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 SPAG1Q07617 926 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 FCHO2Q0JRZ9 810 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 DUSP4Q13115 394 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 RABEP1Q15276 862 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 ENOX2Q16206 610 aaKnown RBP13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 OVOS1Q6IE37 1185 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 CENPPQ6IPU0 288 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 CELF5Q8N6W0 485 aaKnown RBP13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 CSGALNACT1Q8TDX6 532 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 PGLYRP2Q96PD5 576 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 PLIN2Q99541 437 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 CRISPLD1Q9H336 500 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 RPF1Q9H9Y2 349 aaKnown RBP13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 OBP2AQ9NY56 170 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 GMEB2Q9UKD1 530 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 TBX20Q9UMR3 447 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 F5P12259 2224 aa13.04□□□□□ -0.32
CBX3P4-202ENST00000540428 A0A0B4J269 797 aa13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 NPHP3-ACAD11A0A0J9YXS1 232 aa13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 MTMR11A4FU01 709 aa13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 CCNE1P24864 410 aa13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 UBA7P41226 1012 aa13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 LILRA4P59901 499 aa13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 CACNB1Q02641 598 aaPredicted RBP13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 LRRC32Q14392 662 aa13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 ARMCX5Q6P1M9 558 aa13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 ITIH5Q86UX2 942 aa13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 ARID3BQ8IVW6 561 aaPredicted RBP13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 YAF2Q8IY57 180 aa13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 PSMG2Q969U7 264 aa13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 CALML4Q96GE6 196 aa13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 REEP2Q9BRK0 252 aa13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 PARVGQ9HBI0 331 aa13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 CPSF3Q9UKF6 684 aaKnown RBP13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 DERAQ9Y315 318 aa13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 NCANO14594 1321 aa13.03□□□□□ -0.32
CBX3P4-202ENST00000540428 COL4A2P08572 1712 aa13.02□□□□□ -0.32
CBX3P4-202ENST00000540428 H3BQV1 296 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 K7ENM7 598 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 TRAK2O60296 914 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 FAM13AO94988 1023 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 PAPSS2O95340 614 aaPredicted RBP13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 BMP15O95972 392 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 CYP11A1P05108 521 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 TGM1P22735 817 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 WEE1P30291 646 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 CXCL12P48061 93 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 TUFMP49411 452 aaKnown RBP13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 GTF2BQ00403 316 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 POU5F1Q01860 360 aaKnown RBP13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 LAIR1Q6GTX8 287 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 DNAJB7Q7Z6W7 309 aaPredicted RBP13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 GPBP1Q86WP2 473 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 TMEM130Q8N3G9 435 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 SPEM1Q8N4L4 309 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 MYCT1Q8N699 235 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 ATAD1Q8NBU5 361 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 RSPRY1Q96DX4 576 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 SENP8Q96LD8 212 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 MKNK1Q9BUB5 465 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 MSTO1Q9BUK6 570 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 ASB7Q9H672 318 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 ZMYM5Q9UJ78 669 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 DSEQ9UL01 958 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 RAB23Q9ULC3 237 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 DMXL1Q9Y485 3027 aa13.02□□□□□ -0.33
CBX3P4-202ENST00000540428 CEP250Q9BV73 2442 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 ANO9A1A5B4 782 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 MYBPHLA2RUH7 354 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 PIRO00625 290 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 DPYSL4O14531 572 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 PPEF2O14830 753 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 LRP3O75074 770 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 GJB2P29033 226 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 CNR2P34972 360 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 GUCY2FP51841 1108 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 ATXN1P54253 815 aaKnown RBP13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 SMARCB1Q12824 385 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 GAS6Q14393 721 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 TMEM132DQ14C87 1099 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 C8orf34Q49A92 452 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 ARHGAP29Q52LW3 1261 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 ARHGAP15Q53QZ3 475 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 DGKKQ5KSL6 1271 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 C9orf57Q5W0N0 161 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 JADE1Q6IE81 842 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 SLFN12LQ6IEE8 588 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 GAREM2Q75VX8 874 aa13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 RALGPS2Q86X27 583 aaPredicted RBP13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 C2orf15Q8WU43 125 aaKnown RBP13.01□□□□□ -0.33
CBX3P4-202ENST00000540428 FIZ1Q96SL8 496 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms