RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 TRPC7Q9HCX4 862 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 ARL8BQ9NVJ2 186 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 SELENONQ9NZV5 590 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 TTC7AQ9ULT0 858 aaPredicted RBP10□□□□□ -0.81
CTNNA1-243ENST00000540387 FZD1Q9UP38 647 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 DOLKQ9UPQ8 538 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 TRAF3IP3Q9Y228 551 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 TRIM17Q9Y577 477 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 COL2A1P02458 1487 aaPredicted RBP10□□□□□ -0.81
CTNNA1-243ENST00000540387 IGKV6D-41A0A0C4DH26 115 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 TBC1D12O60347 775 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 DKC1O60832 514 aaKnown RBP eCLIP10□□□□□ -0.814e-9■■■□□ 16.1
CTNNA1-243ENST00000540387 ABCB7O75027 752 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 USP1O94782 785 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 NOL4O94818 638 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 GAS8O95995 478 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 GH2P01242 217 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 TFAP2AP05549 437 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 FCER1AP12319 257 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 S100A1P23297 94 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 MCM7P33993 719 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 KLHL30Q0D2K2 578 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 MAPK7Q13164 816 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 DHX34Q14147 1143 aaKnown RBP10□□□□□ -0.81
CTNNA1-243ENST00000540387 TMEM266Q2M3C6 531 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 ABCB5Q2M3G0 1257 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 NADK2Q4G0N4 442 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 ZNF280DQ6N043 979 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 PACS1Q6VY07 963 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 SLFN11Q7Z7L1 901 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 NT5DC3Q86UY8 548 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 RASSF3Q86WH2 238 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 CCDC25Q86WR0 208 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 CROCCP3Q8IVE0 287 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 ALDH16A1Q8IZ83 802 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 PNMA1Q8ND90 353 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 OR6Y1Q8NGX8 325 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 ZFP28Q8NHY6 868 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 PTCD3Q96EY7 689 aaKnown RBP10□□□□□ -0.81
CTNNA1-243ENST00000540387 RUNDC3BQ96NL0 473 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 CYTH2Q99418 400 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 TTC1Q99614 292 aa10□□□□□ -0.81
CTNNA1-243ENST00000540387 SEC23IPQ9Y6Y8 1000 aaKnown RBP10□□□□□ -0.81
CTNNA1-243ENST00000540387 ACSL3O95573 720 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 BAG2O95816 211 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 SLC5A2P31639 672 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 ERFP50548 548 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 RAPGEF1Q13905 1077 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 PPP2R5EQ16537 467 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 RAPH1Q70E73 1250 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 SFR1Q86XK3 245 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 PDSS2Q86YH6 399 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 METTL25Q8N6Q8 603 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 U2AF1L4Q8WU68 220 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 VPS50Q96JG6 964 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 PLIN2Q99541 437 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 ATAD3AQ9NVI7 634 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 ZDHHC7Q9NXF8 308 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 NDC80O14777 642 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 BUD23O43709 281 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 EDF1O60869 148 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 TRMUO75648 421 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 UQCRBP14927 111 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 TCF7P36402 384 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 LONP1P36776 959 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 NOVP48745 357 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 CHN2P52757 468 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 ASPHQ12797 758 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 USP50Q70EL3 339 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 SIAH1Q8IUQ4 282 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 PASD1Q8IV76 773 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 SRRM1Q8IYB3 904 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 PEX5LQ8IYB4 626 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 SLC7A5P1Q8MH63 180 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 ARHGAP24Q8N264 748 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 TNFRSF25Q93038 417 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 DCPSQ96C86 337 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 HES6Q96HZ4 224 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 GBA3Q9H227 469 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 NRDE2Q9H7Z3 1164 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 UBN1Q9NPG3 1134 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 KBTBD4Q9NVX7 518 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 PARP2Q9UGN5 583 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 RABL2BQ9UNT1 228 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 DMTF1Q9Y222 760 aa9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 GPC6Q9Y625 555 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-243ENST00000540387 hCG_1642624A0A1W2PR95 340 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 IQCA1LA6NCM1 817 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 ADM5C9JUS6 153 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 C2CD2LO14523 706 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 TTLL1O95922 423 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 PTGIRP43119 386 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 PDK3Q15120 406 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 TGFBIQ15582 683 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 KYNUQ16719 465 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 ZNF568Q3ZCX4 644 aa9.98□□□□□ -0.81
CTNNA1-243ENST00000540387 SFT2D3Q587I9 215 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms