RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 FAM200AQ8TCP9 573 aa6.53□□□□□ -1.36
CPSF7-219ENST00000539952 HASPINQ8TF76 798 aa6.53□□□□□ -1.36
CPSF7-219ENST00000539952 BRF1Q92994 677 aa6.53□□□□□ -1.36
CPSF7-219ENST00000539952 DYDC2Q96IM9 177 aa6.53□□□□□ -1.36
CPSF7-219ENST00000539952 ZC3H10Q96K80 434 aaKnown RBP6.53□□□□□ -1.36
CPSF7-219ENST00000539952 LXNQ9BS40 222 aa6.53□□□□□ -1.36
CPSF7-219ENST00000539952 FZD8Q9H461 694 aa6.53□□□□□ -1.36
CPSF7-219ENST00000539952 CYP4F11Q9HBI6 524 aa6.53□□□□□ -1.36
CPSF7-219ENST00000539952 KCNMB3Q9NPA1 279 aa6.53□□□□□ -1.36
CPSF7-219ENST00000539952 XPNPEP1Q9NQW7 623 aa6.53□□□□□ -1.36
CPSF7-219ENST00000539952 VPS45Q9NRW7 570 aa6.53□□□□□ -1.36
CPSF7-219ENST00000539952 RXFP3Q9NSD7 469 aa6.53□□□□□ -1.36
CPSF7-219ENST00000539952 DDX19AQ9NUU7 478 aaKnown RBP6.53□□□□□ -1.36
CPSF7-219ENST00000539952 SNTG2Q9NY99 539 aa6.53□□□□□ -1.36
CPSF7-219ENST00000539952 RGL1Q9NZL6 768 aa6.53□□□□□ -1.36
CPSF7-219ENST00000539952 WRAP73Q9P2S5 460 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-219ENST00000539952 RALYQ9UKM9 306 aaKnown RBP6.53□□□□□ -1.36
CPSF7-219ENST00000539952 TPCN1Q9ULQ1 816 aa6.53□□□□□ -1.36
CPSF7-219ENST00000539952 SNX14Q9Y5W7 946 aa6.53□□□□□ -1.36
CPSF7-219ENST00000539952 RALGAPA1Q6GYQ0 2036 aa6.53□□□□□ -1.36
CPSF7-219ENST00000539952 NAV2Q8IVL1 2488 aa6.53□□□□□ -1.36
CPSF7-219ENST00000539952 CCDC194A0A1B0GVG4 234 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 MYBPHLA2RUH7 354 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 GOLGA6L4A6NEF3 574 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 HEPACAM2A8MVW5 462 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 C1QTNF9BB2RNN3 333 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 KIF2AO00139 706 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-219ENST00000539952 TK2O00142 265 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 ACKR2O00590 384 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 PTGESO14684 152 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 SYN3O14994 580 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 ZBTB39O15060 712 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 RNF40O75150 1001 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 RPP40O75818 363 aaKnown RBP6.52□□□□□ -1.37
CPSF7-219ENST00000539952 RHOBTB1O94844 696 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 EPN2O95208 641 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 DEXIO95424 95 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 C1QTNF9P0C862 333 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 VIPR2P41587 438 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 EVCP57679 992 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 DMTNQ08495 405 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 SRSF5Q13243 272 aaKnown RBP6.52□□□□□ -1.37
CPSF7-219ENST00000539952 MRPL58Q14197 206 aaKnown RBP6.52□□□□□ -1.37
CPSF7-219ENST00000539952 CTTNQ14247 550 aaKnown RBP6.52□□□□□ -1.37
CPSF7-219ENST00000539952 SF3A2Q15428 464 aaKnown RBP6.52□□□□□ -1.37
CPSF7-219ENST00000539952 NAB2Q15742 525 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 UPP1Q16831 310 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 INF2Q27J81 1249 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 PLA2G2CQ5R387 149 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 RNF43Q68DV7 783 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 HEATR6Q6AI08 1181 aaKnown RBP6.52□□□□□ -1.37
CPSF7-219ENST00000539952 ATL3Q6DD88 541 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 NCAPH2Q6IBW4 605 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 CPLX2Q6PUV4 134 aaKnown RBP6.52□□□□□ -1.37
CPSF7-219ENST00000539952 BLOC1S2Q6QNY1 142 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 NEK8Q86SG6 692 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 CDR2LQ86X02 465 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-219ENST00000539952 ZBTB8OSQ8IWT0 167 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 CAMKK1Q8N5S9 505 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 ASAP3Q8TDY4 903 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 GAB3Q8WWW8 586 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 TCEAL4Q96EI5 215 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 ZFRQ96KR1 1074 aaKnown RBP6.52□□□□□ -1.37
CPSF7-219ENST00000539952 CCDC43Q96MW1 224 aaKnown RBP6.52□□□□□ -1.37
CPSF7-219ENST00000539952 HSD17B14Q9BPX1 270 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 FUCA2Q9BTY2 467 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 OXCT2Q9BYC2 517 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-219ENST00000539952 AGXT2Q9BYV1 514 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 C2orf40Q9H1Z8 148 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 PDRG1Q9NUG6 133 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 SLC38A7Q9NVC3 462 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 AFF4Q9UHB7 1163 aaKnown RBP6.52□□□□□ -1.37
CPSF7-219ENST00000539952 VAV3Q9UKW4 847 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 PCDHA12Q9UN75 941 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 MYH15Q9Y2K3 1946 aa6.52□□□□□ -1.37
CPSF7-219ENST00000539952 FRYLO94915 3013 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 WDR81Q562E7 1941 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 LRRIQ4A6NIV6 560 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 SMTNL1A8MU46 457 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 SPECC1L-ADORA2AF8WAN1 911 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 ARNTLO00327 626 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 CPLX1O14810 134 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 B4GALT5O43286 388 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 CTIFO43310 598 aaKnown RBP6.51□□□□□ -1.37
CPSF7-219ENST00000539952 CCNT1O60563 726 aaKnown RBP6.51□□□□□ -1.37
CPSF7-219ENST00000539952 GADD45BO75293 160 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-219ENST00000539952 RECQL4O94761 1208 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 MYL4P12829 197 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 CEACAM1P13688 526 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 XBP1P17861 261 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 ATP2B1P20020 1258 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 TKTP29401 623 aaKnown RBP6.51□□□□□ -1.37
CPSF7-219ENST00000539952 MARCKSP29966 332 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-219ENST00000539952 PDIA3P30101 505 aaKnown RBP6.51□□□□□ -1.37
CPSF7-219ENST00000539952 WEE1P30291 646 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 CDC25BP30305 580 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 RPL9P32969 192 aaKnown RBP6.51□□□□□ -1.37
CPSF7-219ENST00000539952 CLCNKBP51801 687 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 EPHA5P54756 1037 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 ARPP19P56211 112 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms