RNA–Protein interactions for RNA: ENST00000539722.5

PRKCQ-203, Transcript of protein kinase C theta, humanhuman

TSL 2 BASIC

Gene PRKCQ, Length 3,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-203ENST00000539722 SMG5Q9UPR3 1016 aaKnown RBP12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 NEU2Q9Y3R4 380 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 DCAF8L1A6NGE4 600 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 VILLO15195 856 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 TBCAO75347 108 aaKnown RBP12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 MAP3K10Q02779 954 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 MSLNQ13421 630 aaPredicted RBP12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 TBC1D10BQ4KMP7 808 aaPredicted RBP12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 SBK1Q52WX2 424 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 KLHDC10Q6PID8 442 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 ACAD11Q709F0 780 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 NOP9Q86U38 636 aaKnown RBP12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 OXNAD1Q96HP4 312 aaPredicted RBP12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 CFAP57Q96MR6 1250 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 KLHL4Q9C0H6 718 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 ANAPC7Q9UJX3 599 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 KDM3AQ9Y4C1 1321 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 TISP43B9A030 160 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 FSCN2O14926 492 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 VCLP18206 1134 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 SSTR1P30872 391 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 GAD2Q05329 585 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 PDK3Q15120 406 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 GRAMD1BQ3KR37 738 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 C6orf163Q5TEZ5 329 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 FBXL19Q6PCT2 694 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 SLC51AQ86UW1 340 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 MYCT1Q8N699 235 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 PSPC1Q8WXF1 523 aaKnown RBP12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 SKA1Q96BD8 255 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 LIN28AQ9H9Z2 209 aaKnown RBP12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 ATAD5Q96QE3 1844 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 TAF1P21675 1872 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 BUD23O43709 281 aaKnown RBP12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 SORBS3O60504 671 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 HNRNPCL1O60812 293 aaKnown RBP12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 PDE5AO76074 875 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 BMP3P12645 472 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 GCLMP48507 274 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 ALDH18A1P54886 795 aaKnown RBP12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 TRIP10Q15642 601 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 TTBK2Q6IQ55 1244 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 ZNF34Q8IZ26 560 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 CCDC24Q8N4L8 307 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 C12orf50Q8NA57 414 aaPredicted RBP12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 APPL1Q9UKG1 709 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 CCDC195A0A1B0GUA6 201 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 A8MXQ7 604 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 VARSP26640 1264 aaKnown RBP12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 CCR3P51677 355 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 NADK2Q4G0N4 442 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 PRR16Q569H4 304 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 TXNRD3Q86VQ6 643 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 ARHGAP24Q8N264 748 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 PIP4K2CQ8TBX8 421 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 CATSPER2Q96P56 530 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 FAM111AQ96PZ2 611 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 ADAMTS6Q9UKP5 1117 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 DNM3Q9UQ16 869 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 GMEB1Q9Y692 573 aa12.86□□□□□ -0.35
PRKCQ-203ENST00000539722 PPP1R11O60927 126 aaPredicted RBP12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 DNAJC6O75061 913 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 CYP19A1P11511 503 aaPredicted RBP12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 CD58P19256 250 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 SLC25A3Q00325 362 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 GK3PQ14409 553 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 GRIK5Q16478 980 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 KCTD21Q4G0X4 260 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 KLC3Q6P597 504 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 ZNF554Q86TJ5 538 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 PDSS2Q86YH6 399 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 TTC25Q96NG3 672 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 LZTS2Q9BRK4 669 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 MAF1Q9H063 256 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 PAIP2BQ9ULR5 123 aaKnown RBP12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 USTQ9Y2C2 406 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 TBC1D30Q9Y2I9 924 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 SLIT2O94813 1529 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 C15orf38-AP3S2A0A0A6YYH1 394 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 PI4K2BG5E9Z4 385 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 IFNB1P01574 187 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 BCRP11274 1271 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 ACTR3P61158 418 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 KIF22Q14807 665 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 SLC44A4Q53GD3 710 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 IYDQ6PHW0 289 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 ARPINQ7Z6K5 226 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 NLRX1Q86UT6 975 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 METTL25Q8N6Q8 603 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 POU5F2Q8N7G0 328 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 ZBTB8BQ8NAP8 495 aaPredicted RBP12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 DGCR14Q96DF8 476 aaKnown RBP12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 ERLEC1Q96DZ1 483 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 CYP4F11Q9HBI6 524 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 IL1RAPL1Q9NZN1 696 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 ZNF180Q9UJW8 692 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 PACSIN3Q9UKS6 424 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 DOLKQ9UPQ8 538 aa12.85□□□□□ -0.35
PRKCQ-203ENST00000539722 DLDP09622 509 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms