RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 ACRP10323 421 aa17.27■□□□□ 0.35
TRAF3-204ENST00000539721 TNFAIP3P21580 790 aa17.27■□□□□ 0.35
TRAF3-204ENST00000539721 GATMP50440 423 aa17.27■□□□□ 0.35
TRAF3-204ENST00000539721 LILRA4P59901 499 aa17.27■□□□□ 0.35
TRAF3-204ENST00000539721 KRT83P78385 493 aa17.27■□□□□ 0.35
TRAF3-204ENST00000539721 GFPT1Q06210 699 aaPredicted RBP17.27■□□□□ 0.35
TRAF3-204ENST00000539721 SPA17Q15506 151 aa17.27■□□□□ 0.35
TRAF3-204ENST00000539721 UPP1Q16831 310 aa17.27■□□□□ 0.35
TRAF3-204ENST00000539721 NOP9Q86U38 636 aaKnown RBP17.27■□□□□ 0.35
TRAF3-204ENST00000539721 CRIPAKQ8N1N5 446 aa17.27■□□□□ 0.35
TRAF3-204ENST00000539721 SLC20A1Q8WUM9 679 aa17.27■□□□□ 0.35
TRAF3-204ENST00000539721 RABGGTAQ92696 567 aa17.27■□□□□ 0.35
TRAF3-204ENST00000539721 FAM193BQ96PV7 902 aaPredicted RBP17.27■□□□□ 0.35
TRAF3-204ENST00000539721 PAAF1Q9BRP4 392 aa17.27■□□□□ 0.35
TRAF3-204ENST00000539721 IL23AQ9NPF7 189 aa17.27■□□□□ 0.35
TRAF3-204ENST00000539721 TRMT1Q9NXH9 659 aaKnown RBP17.27■□□□□ 0.35
TRAF3-204ENST00000539721 GDAP2Q9NXN4 497 aa17.27■□□□□ 0.35
TRAF3-204ENST00000539721 PCDH10Q9P2E7 1040 aa17.27■□□□□ 0.35
TRAF3-204ENST00000539721 ADAMTS1Q9UHI8 967 aa17.27■□□□□ 0.35
TRAF3-204ENST00000539721 NOCTQ9UK39 431 aaKnown RBP17.27■□□□□ 0.35
TRAF3-204ENST00000539721 FNDC1Q4ZHG4 1894 aaPredicted RBP17.27■□□□□ 0.35
TRAF3-204ENST00000539721 CCP110O43303 1012 aa17.26■□□□□ 0.35
TRAF3-204ENST00000539721 ZSCAN12O43309 604 aa17.26■□□□□ 0.35
TRAF3-204ENST00000539721 ZNF132P52740 706 aa17.26■□□□□ 0.35
TRAF3-204ENST00000539721 BMS1Q14692 1282 aaKnown RBP17.26■□□□□ 0.35
TRAF3-204ENST00000539721 SLC18A3Q16572 532 aa17.26■□□□□ 0.35
TRAF3-204ENST00000539721 ZNF394Q53GI3 561 aa17.26■□□□□ 0.35
TRAF3-204ENST00000539721 TAF3Q5VWG9 929 aa17.26■□□□□ 0.35
TRAF3-204ENST00000539721 CCAR2Q8N163 923 aaKnown RBP17.26■□□□□ 0.35
TRAF3-204ENST00000539721 TTC39CQ8N584 583 aa17.26■□□□□ 0.35
TRAF3-204ENST00000539721 CASD1Q96PB1 797 aa17.26■□□□□ 0.35
TRAF3-204ENST00000539721 SYT11Q9BT88 431 aa17.26■□□□□ 0.35
TRAF3-204ENST00000539721 HTATIP2Q9BUP3 242 aa17.26■□□□□ 0.35
TRAF3-204ENST00000539721 FAM124BQ9H5Z6 455 aaPredicted RBP17.26■□□□□ 0.35
TRAF3-204ENST00000539721 SEPT11Q9NVA2 429 aaKnown RBP17.26■□□□□ 0.35
TRAF3-204ENST00000539721 A0A087X0T9 212 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 HUS1O60921 280 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 EFCAB14O75071 495 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 DDHD2O94830 711 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 UPP2O95045 317 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 LCA5LO95447 670 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 CALCAP01258 141 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 FAM228BP0C875 321 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 GNA15P30679 374 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 CYP27A1Q02318 531 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 PPIGQ13427 754 aaKnown RBP eCLIP17.25■□□□□ 0.35
TRAF3-204ENST00000539721 ZNF280BQ86YH2 543 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 GLYCTKQ8IVS8 523 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 C3orf58Q8NDZ4 430 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 LNX1Q8TBB1 728 aaPredicted RBP17.25■□□□□ 0.35
TRAF3-204ENST00000539721 BARX2Q9UMQ3 279 aaPredicted RBP17.25■□□□□ 0.35
TRAF3-204ENST00000539721 REXO2Q9Y3B8 237 aaKnown RBP17.25■□□□□ 0.35
TRAF3-204ENST00000539721 USP27XA6NNY8 438 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 TBKBP1A7MCY6 615 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 DDX3XO00571 662 aaKnown RBP eCLIP17.25■□□□□ 0.359e-11■■■■■ 29.2
TRAF3-204ENST00000539721 ZNF263O14978 683 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 CILPO75339 1184 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 AMHP03971 560 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 CDR2Q01850 454 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 FPGSQ05932 587 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 DSC1Q08554 894 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 INCA1Q0VD86 236 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 SOWAHAQ2M3V2 549 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 DSTYKQ6XUX3 929 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 APPL2Q8NEU8 664 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 RSPH1Q8WYR4 309 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 BADQ92934 168 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 MRPL45Q9BRJ2 306 aaKnown RBP17.25■□□□□ 0.35
TRAF3-204ENST00000539721 MRPL9Q9BYD2 267 aaKnown RBP17.25■□□□□ 0.35
TRAF3-204ENST00000539721 KCND1Q9NSA2 647 aa17.25■□□□□ 0.35
TRAF3-204ENST00000539721 PUF60Q9UHX1 559 aaKnown RBP17.25■□□□□ 0.35
TRAF3-204ENST00000539721 CYB561D2O14569 222 aa17.24■□□□□ 0.35
TRAF3-204ENST00000539721 THAP12O43422 761 aa17.24■□□□□ 0.35
TRAF3-204ENST00000539721 B4GALT3O60512 393 aa17.24■□□□□ 0.35
TRAF3-204ENST00000539721 B3GAT3O94766 335 aa17.24■□□□□ 0.35
TRAF3-204ENST00000539721 MMEP08473 750 aa17.24■□□□□ 0.35
TRAF3-204ENST00000539721 CHRNB2P17787 502 aa17.24■□□□□ 0.35
TRAF3-204ENST00000539721 IGFBP6P24592 240 aaPredicted RBP17.24■□□□□ 0.35
TRAF3-204ENST00000539721 NDST1P52848 882 aa17.24■□□□□ 0.35
TRAF3-204ENST00000539721 DCLRE1AQ6PJP8 1040 aa17.24■□□□□ 0.35
TRAF3-204ENST00000539721 KIAA1328Q86T90 577 aa17.24■□□□□ 0.35
TRAF3-204ENST00000539721 ZNF677Q86XU0 584 aa17.24■□□□□ 0.35
TRAF3-204ENST00000539721 COLGALT2Q8IYK4 626 aa17.24■□□□□ 0.35
TRAF3-204ENST00000539721 TOP6BLQ8N6T0 577 aa17.24■□□□□ 0.35
TRAF3-204ENST00000539721 OLIG1Q8TAK6 271 aa17.24■□□□□ 0.35
TRAF3-204ENST00000539721 WHAMMQ8TF30 809 aa17.24■□□□□ 0.35
TRAF3-204ENST00000539721 ABHD8Q96I13 439 aa17.24■□□□□ 0.35
TRAF3-204ENST00000539721 SENP8Q96LD8 212 aa17.24■□□□□ 0.35
TRAF3-204ENST00000539721 HMGXB4Q9UGU5 601 aa17.24■□□□□ 0.35
TRAF3-204ENST00000539721 L1RE1Q9UN81 338 aa17.24■□□□□ 0.35
TRAF3-204ENST00000539721 TACC1O75410 805 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 BAIAP3O94812 1187 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 MAGEA1P43355 309 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 OR1G1P47890 313 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 RAD23BP54727 409 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 WDR5P61964 334 aaKnown RBP17.23■□□□□ 0.35
TRAF3-204ENST00000539721 FMO1Q01740 532 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 ORC1Q13415 861 aa17.23■□□□□ 0.35
TRAF3-204ENST00000539721 PAN2Q504Q3 1202 aaKnown RBP17.23■□□□□ 0.35
TRAF3-204ENST00000539721 CCDC122Q5T0U0 273 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms