RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 DDHD2O94830 711 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 VNN1O95497 513 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 CST3P01034 146 aaPredicted RBP10.95□□□□□ -0.66
CLPB-210ENST00000539148 UCHL3P15374 230 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 TYMPP19971 482 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 PCSK1P29120 753 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 WNT7BP56706 349 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 CCZ1BP86790 482 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 CCZ1P86791 482 aaPredicted RBP10.95□□□□□ -0.66
CLPB-210ENST00000539148 SOX4Q06945 474 aaPredicted RBP10.95□□□□□ -0.66
CLPB-210ENST00000539148 PTPN14Q15678 1187 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 MAPRE1Q15691 268 aaKnown RBP10.95□□□□□ -0.66
CLPB-210ENST00000539148 USP41Q3LFD5 358 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 C9orf50Q5SZB4 431 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 PDE12Q6L8Q7 609 aaKnown RBP10.95□□□□□ -0.66
CLPB-210ENST00000539148 UNC93AQ86WB7 457 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 COLGALT1Q8NBJ5 622 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 TNIP3Q96KP6 325 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 SUSD3Q96L08 255 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 ZNF830Q96NB3 372 aaPredicted RBP10.95□□□□□ -0.66
CLPB-210ENST00000539148 TGS1Q96RS0 853 aaKnown RBP10.95□□□□□ -0.66
CLPB-210ENST00000539148 LSM14BQ9BX40 385 aaKnown RBP10.95□□□□□ -0.66
CLPB-210ENST00000539148 STK33Q9BYT3 514 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 CWH43Q9H720 699 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 RC3H2Q9HBD1 1191 aaKnown RBP10.95□□□□□ -0.66
CLPB-210ENST00000539148 UBE2TQ9NPD8 197 aaPredicted RBP10.95□□□□□ -0.66
CLPB-210ENST00000539148 FAM207AQ9NSI2 230 aaPredicted RBP10.95□□□□□ -0.66
CLPB-210ENST00000539148 NXF1Q9UBU9 619 aaKnown RBP10.95□□□□□ -0.66
CLPB-210ENST00000539148 SIX4Q9UIU6 781 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 KIAA1257Q9ULG3 409 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 PCDHB8Q9UN66 801 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 PLAGL2Q9UPG8 496 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 LZTS1Q9Y250 596 aa10.95□□□□□ -0.66
CLPB-210ENST00000539148 PRG3Q9Y2Y8 225 aaPredicted RBP10.95□□□□□ -0.66
CLPB-210ENST00000539148 LUC7L2Q9Y383 392 aaKnown RBP10.95□□□□□ -0.66
CLPB-210ENST00000539148 MYH10P35580 1976 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 AKR1B15C9JRZ8 316 aaPredicted RBP10.94□□□□□ -0.66
CLPB-210ENST00000539148 M0QZQ0 153 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 CYB561D2O14569 222 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 MEFVO15553 781 aaPredicted RBP10.94□□□□□ -0.66
CLPB-210ENST00000539148 TACC1O75410 805 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 SLC9A1P19634 815 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 CTNNB1P35222 781 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 BMPR1AP36894 532 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 STAT1P42224 750 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 SLC11A1P49279 550 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 AARSP49588 968 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLPB-210ENST00000539148 PLCB3Q01970 1234 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 SMARCB1Q12824 385 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 CUL2Q13617 745 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 RAPGEF1Q13905 1077 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 KLHDC7AQ5VTJ3 777 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 ELMSAN1Q6PJG2 1045 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 ANKS3Q6ZW76 656 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 VPS36Q86VN1 386 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 IGSF21Q96ID5 467 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 SENP8Q96LD8 212 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 BCO2Q9BYV7 579 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 GOLGA2P5Q9HBQ8 144 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLPB-210ENST00000539148 DNAJB4Q9UDY4 337 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 COLQQ9Y215 455 aaPredicted RBP10.94□□□□□ -0.66
CLPB-210ENST00000539148 SIK3Q9Y2K2 1263 aa10.94□□□□□ -0.66
CLPB-210ENST00000539148 BZW2Q9Y6E2 419 aaKnown RBP10.94□□□□□ -0.66
CLPB-210ENST00000539148 MRPL42Q9Y6G3 142 aaKnown RBP10.94□□□□□ -0.66
CLPB-210ENST00000539148 TMEM265A0A087WTH1 108 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 C5orf67F2Z3F1 127 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 TEX33O43247 280 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 CYP11A1P05108 521 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 URODP06132 367 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 FERP16591 822 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 GTF2F1P35269 517 aaKnown RBP eCLIP10.93□□□□□ -0.66
CLPB-210ENST00000539148 GATMP50440 423 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 AFF1P51825 1210 aaKnown RBP10.93□□□□□ -0.66
CLPB-210ENST00000539148 GUCY2FP51841 1108 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 POLR2FP61218 127 aaKnown RBP10.93□□□□□ -0.66
CLPB-210ENST00000539148 TUBB4BP68371 445 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 ZBED6P86452 979 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 TSPY1Q01534 308 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 YWHAHQ04917 246 aaPredicted RBP10.93□□□□□ -0.66
CLPB-210ENST00000539148 PTK2Q05397 1052 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 LRMPQ12912 555 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 STILQ15468 1287 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 PPP2R2DQ66LE6 453 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 FUT10Q6P4F1 479 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 CHRDL2Q6WN34 429 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 DDX53Q86TM3 631 aaKnown RBP10.93□□□□□ -0.66
CLPB-210ENST00000539148 ADGRF2Q8IZF7 708 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 CCAR2Q8N163 923 aaKnown RBP10.93□□□□□ -0.66
CLPB-210ENST00000539148 SLC39A11Q8N1S5 342 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 MYRIPQ8NFW9 859 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 KIF18AQ8NI77 898 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 LMO3Q8TAP4 145 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 SYN2Q92777 582 aaPredicted RBP10.93□□□□□ -0.66
CLPB-210ENST00000539148 SEMA4DQ92854 862 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 PPP2R3CQ969Q6 453 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 BAG1Q99933 345 aaPredicted RBP10.93□□□□□ -0.66
CLPB-210ENST00000539148 TTPALQ9BTX7 342 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 LMAN2LQ9H0V9 348 aa10.93□□□□□ -0.66
CLPB-210ENST00000539148 XYLT2Q9H1B5 865 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms