RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 GPR17Q13304 367 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 PLD1Q13393 1074 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 FZD5Q13467 585 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 SF3A1Q15459 793 aaKnown RBP13.58□□□□□ -0.24
VAMP1-206ENST00000538970 TEAD2Q15562 447 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 OVOS1Q6IE37 1185 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 JADE1Q6IE81 842 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 VITQ6UXI7 678 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 USP37Q86T82 979 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 TMC8Q8IU68 726 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 CD302Q8IX05 232 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 SHKBP1Q8TBC3 707 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 ZSCAN18Q8TBC5 510 aaPredicted RBP13.58□□□□□ -0.24
VAMP1-206ENST00000538970 LARP4BQ92615 738 aaKnown RBP13.58□□□□□ -0.24
VAMP1-206ENST00000538970 TRMT61BQ9BVS5 477 aaKnown RBP13.58□□□□□ -0.24
VAMP1-206ENST00000538970 LRRC3Q9BY71 257 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 ZHX3Q9H4I2 956 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 BRD9Q9H8M2 597 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 TRPV4Q9HBA0 871 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 MRPS17Q9Y2R5 130 aaKnown RBP13.58□□□□□ -0.24
VAMP1-206ENST00000538970 NCANO14594 1321 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 OTOGLQ3ZCN5 2332 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 MTMR11A4FU01 709 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 SPTLC1O15269 473 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 NCAM2O15394 837 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 KINO60870 393 aaKnown RBP13.57□□□□□ -0.24
VAMP1-206ENST00000538970 ODC1P11926 461 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 PSMC3P17980 439 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 ABCD1P33897 745 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 VIPR2P41587 438 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 ATXN1P54253 815 aaKnown RBP13.57□□□□□ -0.24
VAMP1-206ENST00000538970 LILRA4P59901 499 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 CSTF1Q05048 431 aaKnown RBP13.57□□□□□ -0.24
VAMP1-206ENST00000538970 DUSP4Q13115 394 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 MYBPC2Q14324 1141 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 C9orf57Q5W0N0 161 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 CENPPQ6IPU0 288 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 ZNF687Q8N1G0 1237 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 SUMF1Q8NBK3 374 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 DEPDC1BQ8WUY9 529 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 IRF7Q92985 503 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 FAM212AQ96EL1 285 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 CCSER1Q9C0I3 900 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 ST6GALNAC4Q9H4F1 302 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 TRPV5Q9NQA5 729 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 PRMT8Q9NR22 394 aaPredicted RBP13.57□□□□□ -0.24
VAMP1-206ENST00000538970 DERAQ9Y315 318 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 PCDHGA2Q9Y5H1 932 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 CHD6Q8TD26 2715 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 FANCMQ8IYD8 2048 aa13.57□□□□□ -0.24
VAMP1-206ENST00000538970 BAHCC1Q9P281 2608 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 A0A1W2PRU2 124 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 TISP43B9A030 160 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 ANKRD63C9JTQ0 380 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 ARNTLO00327 626 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 PIRO00625 290 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 MAN2B1O00754 1011 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 PAX3P23760 479 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 GDI1P31150 447 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 ACOT2P49753 483 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 EPHB3P54753 998 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 TMEM132DQ14C87 1099 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 ZC2HC1CQ53FD0 456 aaPredicted RBP13.56□□□□□ -0.24
VAMP1-206ENST00000538970 TTC9BQ8N6N2 239 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 OR10T2Q8NGX3 314 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 NELL1Q92832 810 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 SENP8Q96LD8 212 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 TMEM209Q96SK2 561 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 GPR88Q9GZN0 384 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 ASB7Q9H672 318 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 ZNF334Q9HCZ1 680 aaPredicted RBP13.56□□□□□ -0.24
VAMP1-206ENST00000538970 STYXL1Q9Y6J8 313 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 PIAS3Q9Y6X2 628 aa13.56□□□□□ -0.24
VAMP1-206ENST00000538970 MAP1BP46821 2468 aaKnown RBP13.55□□□□□ -0.24
VAMP1-206ENST00000538970 ANO9A1A5B4 782 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 VPS37CA5D8V6 355 aaPredicted RBP13.55□□□□□ -0.24
VAMP1-206ENST00000538970 HEPACAM2A8MVW5 462 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 CYP11A1P05108 521 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 DDIT3P35638 169 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 ALDH1A3P47895 512 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 MTAPQ13126 283 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 CUL4AQ13619 759 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 PTPAQ15257 358 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 STXBP5Q5T5C0 1151 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 ADALQ6DHV7 355 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 USP49Q70CQ1 688 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 MFSD6LQ8IWD5 586 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 ATAD1Q8NBU5 361 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 ZBTB44Q8NCP5 570 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 PSMG2Q969U7 264 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 RSPRY1Q96DX4 576 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 BORCS6Q96GS4 357 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 EPSTI1Q96J88 318 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 IKZF4Q9H2S9 585 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 CHRDQ9H2X0 955 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 SLITRK6Q9H5Y7 841 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 ZSCAN32Q9NX65 697 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 HSFX1Q9UBD0 423 aa13.55□□□□□ -0.24
VAMP1-206ENST00000538970 NDRG2Q9UN36 371 aaKnown RBP13.55□□□□□ -0.24
VAMP1-206ENST00000538970 SLC27A5Q9Y2P5 690 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms