RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 CCDC39Q9UFE4 941 aa9.38□□□□□ -0.91
DDB1-212ENST00000538470 DSEQ9UL01 958 aa9.38□□□□□ -0.91
DDB1-212ENST00000538470 C2CD2Q9Y426 696 aa9.38□□□□□ -0.91
DDB1-212ENST00000538470 ASB3Q9Y575 518 aa9.38□□□□□ -0.91
DDB1-212ENST00000538470 STYXL1Q9Y6J8 313 aa9.38□□□□□ -0.91
DDB1-212ENST00000538470 CEP250Q9BV73 2442 aa9.38□□□□□ -0.91
DDB1-212ENST00000538470 ANO9A1A5B4 782 aa9.37□□□□□ -0.91
DDB1-212ENST00000538470 MTMR11A4FU01 709 aa9.37□□□□□ -0.91
DDB1-212ENST00000538470 VPS37CA5D8V6 355 aaPredicted RBP9.37□□□□□ -0.91
DDB1-212ENST00000538470 FAM170BA6NMN3 283 aa9.37□□□□□ -0.91
DDB1-212ENST00000538470 KINO60870 393 aaKnown RBP9.37□□□□□ -0.91
DDB1-212ENST00000538470 MOSPD3O75425 235 aa9.37□□□□□ -0.91
DDB1-212ENST00000538470 GAP43P17677 238 aa9.37□□□□□ -0.91
DDB1-212ENST00000538470 PSMC3P17980 439 aa9.37□□□□□ -0.91
DDB1-212ENST00000538470 TARSP26639 723 aaKnown RBP9.37□□□□□ -0.91
DDB1-212ENST00000538470 SMARCB1Q12824 385 aa9.37□□□□□ -0.91
DDB1-212ENST00000538470 ALCAMQ13740 583 aa9.37□□□□□ -0.91
DDB1-212ENST00000538470 DHX8Q14562 1220 aaKnown RBP9.37□□□□□ -0.91
DDB1-212ENST00000538470 C9orf57Q5W0N0 161 aa9.37□□□□□ -0.91
DDB1-212ENST00000538470 TANGO2Q6ICL3 276 aa9.37□□□□□ -0.91
DDB1-212ENST00000538470 VITQ6UXI7 678 aa9.37□□□□□ -0.91
DDB1-212ENST00000538470 NT5DC4Q86YG4 428 aa9.37□□□□□ -0.91
DDB1-212ENST00000538470 TMC8Q8IU68 726 aa9.37□□□□□ -0.91
DDB1-212ENST00000538470 ZSCAN18Q8TBC5 510 aaPredicted RBP9.37□□□□□ -0.91
DDB1-212ENST00000538470 TRMT61BQ9BVS5 477 aaKnown RBP9.37□□□□□ -0.91
DDB1-212ENST00000538470 PLA2G2FQ9BZM2 168 aa9.37□□□□□ -0.91
DDB1-212ENST00000538470 PRMT8Q9NR22 394 aaPredicted RBP9.37□□□□□ -0.91
DDB1-212ENST00000538470 SPATA6Q9NWH7 488 aaPredicted RBP9.37□□□□□ -0.91
DDB1-212ENST00000538470 EXOC7Q9UPT5 735 aa9.37□□□□□ -0.91
DDB1-212ENST00000538470 PCDHGA2Q9Y5H1 932 aa9.37□□□□□ -0.91
DDB1-212ENST00000538470 SRPRBQ9Y5M8 271 aaKnown RBP9.37□□□□□ -0.91
DDB1-212ENST00000538470 R4GN57 208 aa9.37□□□□□ -0.91
DDB1-212ENST00000538470 GPR179Q6PRD1 2367 aa9.37□□□□□ -0.91
DDB1-212ENST00000538470 PIRO00625 290 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 PPEF2O14830 753 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 LRRN2O75325 713 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 PPP1R37O75864 691 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 IL18RAPO95256 599 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 VNN2O95498 520 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 NFICP08651 508 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 MYL4P12829 197 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 NMT1P30419 496 aaKnown RBP9.36□□□□□ -0.91
DDB1-212ENST00000538470 DDIT3P35638 169 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 ALDH1A3P47895 512 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 TAF6P49848 677 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 GUCY2FP51841 1108 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 MLLT6P55198 1093 aaPredicted RBP9.36□□□□□ -0.91
DDB1-212ENST00000538470 LILRA4P59901 499 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 RESTQ13127 1097 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 GRM2Q14416 872 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 POSTNQ15063 836 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 PTPAQ15257 358 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 SV2CQ496J9 727 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 ADALQ6DHV7 355 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 CENPPQ6IPU0 288 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 ARMCX5Q6P1M9 558 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 POTEHQ6S545 545 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 ITIH5Q86UX2 942 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 SFR1Q86XK3 245 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 MAML2Q8IZL2 1156 aaPredicted RBP9.36□□□□□ -0.91
DDB1-212ENST00000538470 HS6ST3Q8IZP7 471 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 SHKBP1Q8TBC3 707 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 KCNG4Q8TDN1 519 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 C2orf15Q8WU43 125 aaKnown RBP9.36□□□□□ -0.91
DDB1-212ENST00000538470 PSMG2Q969U7 264 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 FAM212AQ96EL1 285 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 SENP8Q96LD8 212 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 ZNF560Q96MR9 790 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 LRRC3Q9BY71 257 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 FAM126AQ9BYI3 521 aaPredicted RBP9.36□□□□□ -0.91
DDB1-212ENST00000538470 DNAJC25Q9H1X3 360 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 SLITRK6Q9H5Y7 841 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 ZNF334Q9HCZ1 680 aaPredicted RBP9.36□□□□□ -0.91
DDB1-212ENST00000538470 OLFML3Q9NRN5 406 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 HEBP1Q9NRV9 189 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 ZMYM5Q9UJ78 669 aa9.36□□□□□ -0.91
DDB1-212ENST00000538470 FBXO2Q9UK22 296 aaPredicted RBP9.36□□□□□ -0.91
DDB1-212ENST00000538470 AGO2Q9UKV8 859 aaKnown RBP9.36□□□□□ -0.91
DDB1-212ENST00000538470 TIMM13Q9Y5L4 95 aaPredicted RBP9.36□□□□□ -0.91
DDB1-212ENST00000538470 WDR87Q6ZQQ6 2873 aa9.35□□□□□ -0.91
DDB1-212ENST00000538470 HELZP42694 1942 aaKnown RBP9.35□□□□□ -0.91
DDB1-212ENST00000538470 ANKRD63C9JTQ0 380 aa9.35□□□□□ -0.91
DDB1-212ENST00000538470 ZNF263O14978 683 aa9.35□□□□□ -0.91
DDB1-212ENST00000538470 OR4Q2P0C623 313 aa9.35□□□□□ -0.91
DDB1-212ENST00000538470 WEE1P30291 646 aa9.35□□□□□ -0.91
DDB1-212ENST00000538470 GDI1P31150 447 aa9.35□□□□□ -0.91
DDB1-212ENST00000538470 PNPLA4P41247 253 aa9.35□□□□□ -0.91
DDB1-212ENST00000538470 TUFMP49411 452 aaKnown RBP9.35□□□□□ -0.91
DDB1-212ENST00000538470 ACOT2P49753 483 aa9.35□□□□□ -0.91
DDB1-212ENST00000538470 DUSP4Q13115 394 aa9.35□□□□□ -0.91
DDB1-212ENST00000538470 PPP2R5DQ14738 602 aa9.35□□□□□ -0.91
DDB1-212ENST00000538470 VEPH1Q14D04 833 aa9.35□□□□□ -0.91
DDB1-212ENST00000538470 TEAD2Q15562 447 aa9.35□□□□□ -0.91
DDB1-212ENST00000538470 ZC2HC1CQ53FD0 456 aaPredicted RBP9.35□□□□□ -0.91
DDB1-212ENST00000538470 ARHGAP15Q53QZ3 475 aa9.35□□□□□ -0.91
DDB1-212ENST00000538470 L1TD1Q5T7N2 865 aaKnown RBP9.35□□□□□ -0.91
DDB1-212ENST00000538470 RRAGBQ5VZM2 374 aa9.35□□□□□ -0.91
DDB1-212ENST00000538470 CCDC73Q6ZRK6 1079 aa9.35□□□□□ -0.91
DDB1-212ENST00000538470 SV2BQ7L1I2 683 aa9.35□□□□□ -0.91
DDB1-212ENST00000538470 ZNF720Q7Z2F6 126 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms