RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 ZNF445P59923 1031 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 CYP24A1Q07973 514 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 TERF2Q15554 542 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF699Q32M78 642 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 C4orf46Q504U0 113 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 FUT10Q6P4F1 479 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 TRAF7Q6Q0C0 670 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 MTSS1LQ765P7 747 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 OTOP3Q7RTS5 596 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 ZBTB33Q86T24 672 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 GOLGA6L1Q8N7Z2 621 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 STKLD1Q8NE28 680 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 FBXL13Q8NEE6 735 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 SPATA20Q8TB22 786 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 C17orf50Q8WW18 174 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 ELOVL4Q9GZR5 314 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 RXFP1Q9HBX9 757 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 PTPRHQ9HD43 1115 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 SLC39A2Q9NP94 309 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 CYLDQ9NQC7 956 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 SNTG2Q9NY99 539 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 CPSF2Q9P2I0 782 aaKnown RBP3.82□□□□□ -1.8
PTPN22-211ENST00000538253 AFF4Q9UHB7 1163 aaKnown RBP3.82□□□□□ -1.8
PTPN22-211ENST00000538253 GDAQ9Y2T3 454 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 PCDHB5Q9Y5E4 795 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 TTC26A0AVF1 554 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 LINC01553A4QN01 128 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 ARL5CA6NH57 179 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 SLC9A3R1O14745 358 aaPredicted RBP3.82□□□□□ -1.8
PTPN22-211ENST00000538253 EDIL3O43854 480 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 FGF18O76093 207 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 B3GAT3O94766 335 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 CXCL14O95715 111 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 CCDC175P0C221 793 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 CSH1P0DML2 217 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 CSH2P0DML3 217 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 KLRC2P26717 231 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 NMT1P30419 496 aaKnown RBP3.82□□□□□ -1.8
PTPN22-211ENST00000538253 YWHAHQ04917 246 aaPredicted RBP3.82□□□□□ -1.8
PTPN22-211ENST00000538253 DSC1Q08554 894 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 SFSWAPQ12872 951 aaKnown RBP3.82□□□□□ -1.8
PTPN22-211ENST00000538253 COL9A3Q14050 684 aaPredicted RBP3.82□□□□□ -1.8
PTPN22-211ENST00000538253 SKIV2LQ15477 1246 aaKnown RBP3.82□□□□□ -1.8
PTPN22-211ENST00000538253 IL17AQ16552 155 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 AMHR2Q16671 573 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 FAM173BQ6P4H8 233 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 TAX1BP1Q86VP1 789 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF677Q86XU0 584 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 EFHBQ8N7U6 833 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 OVCA2Q8WZ82 227 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 GJA10Q969M2 543 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 C18orf25Q96B23 403 aaPredicted RBP3.82□□□□□ -1.8
PTPN22-211ENST00000538253 GAD1Q99259 594 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 FAM213AQ9BRX8 229 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 STRA6Q9BX79 667 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 NIF3L1Q9GZT8 377 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 AGO3Q9H9G7 860 aaKnown RBP3.82□□□□□ -1.8
PTPN22-211ENST00000538253 GPRC5CQ9NQ84 441 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 GDAP2Q9NXN4 497 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 RRN3Q9NYV6 651 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 MAN1B1Q9UKM7 699 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 ZDHHC9Q9Y397 364 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 LOC100996750A0A140TA64 210 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 SMIM28A0A1B0GU29 152 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 ZBTB24O43167 697 aaPredicted RBP3.82□□□□□ -1.8
PTPN22-211ENST00000538253 FBXO21O94952 628 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 CYP11A1P05108 521 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 GALTP07902 379 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 KRT19P08727 400 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 PAEPP09466 180 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 MAGEA9P43362 315 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 MAGEA11P43364 429 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 HNRNPH2P55795 449 aaKnown RBP3.82□□□□□ -1.8
PTPN22-211ENST00000538253 IRX1P78414 480 aaPredicted RBP3.82□□□□□ -1.8
PTPN22-211ENST00000538253 DSG1Q02413 1049 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 EHHADHQ08426 723 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 CUL4BQ13620 913 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 PSMD5Q16401 504 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 FXNQ16595 210 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 CTXN3Q4LDR2 81 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 EPC2Q52LR7 807 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 ARSHQ5FYA8 562 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 PPM1LQ5SGD2 360 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 AP1ARQ63HQ0 302 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 OVOS1Q6IE37 1185 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 SPATA2LQ8IUW3 424 aaPredicted RBP3.82□□□□□ -1.8
PTPN22-211ENST00000538253 NELFCDQ8IXH7 590 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 NEK11Q8NG66 645 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 FAM200AQ8TCP9 573 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 ATXN2LQ8WWM7 1075 aaKnown RBP3.82□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF512Q96ME7 567 aaPredicted RBP3.82□□□□□ -1.8
PTPN22-211ENST00000538253 CASD1Q96PB1 797 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 ACBD6Q9BR61 282 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 KRTAP4-6Q9BYQ5 205 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 NXF3Q9H4D5 531 aaKnown RBP3.82□□□□□ -1.8
PTPN22-211ENST00000538253 DEF6Q9H4E7 631 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 FBXO44Q9H4M3 255 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 GRPEL1Q9HAV7 217 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 LMBRD1Q9NUN5 540 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 DMAC2Q9NW81 257 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms