RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 PPP1R21Q6ZMI0 780 aa13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 USP49Q70CQ1 688 aa13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 BCAS4Q8TDM0 211 aa13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 KRT12Q99456 494 aa13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 CXCL10P02778 98 aa13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 ARF4P18085 180 aaPredicted RBP13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 NRIP1P48552 1158 aa13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 AP3M2P53677 418 aa13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 BCAR1P56945 870 aa13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 GNGT1P63211 74 aa13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 PLD1Q13393 1074 aa13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 KLHL23Q8NBE8 558 aa13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 ZNF512Q96ME7 567 aaPredicted RBP13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 APOL5Q9BWW9 433 aa13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 IRX2Q9BZI1 471 aaPredicted RBP13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 NUCKS1Q9H1E3 243 aaKnown RBP13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 ADAMTS1Q9UHI8 967 aa13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 NDUFA10O95299 355 aa13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 TAF6P49848 677 aa13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 SNX16P57768 344 aa13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 SCN4BQ8IWT1 228 aa13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 TMEM175Q9BSA9 504 aa13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 EEF1GP26641 437 aaKnown RBP13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 EIF4A3P38919 411 aaKnown RBP13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 ARL1P40616 181 aaPredicted RBP13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 PPP2R5DQ14738 602 aa13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 ZNF667Q5HYK9 610 aa13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 GPR153Q6NV75 609 aa13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 ANKRD42Q8N9B4 389 aa13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 OR6B3Q8NGW1 331 aa13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 HASPINQ8TF76 798 aa13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 CDCA3Q99618 268 aaPredicted RBP13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 PCSK1P29120 753 aa13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 SLC7A5Q01650 507 aa13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 ANKS3Q6ZW76 656 aa13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 DHX40Q8IX18 779 aaKnown RBP13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 CCDC97Q96F63 343 aaPredicted RBP13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 NXF1Q9UBU9 619 aaKnown RBP13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 HESX1Q9UBX0 185 aa13.01□□□□□ -0.33
TSPAN9-206ENST00000537971 CCNE1P24864 410 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 PIK3CAP42336 1068 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 COASYQ13057 564 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 GRB10Q13322 594 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 DCLRE1AQ6PJP8 1040 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 PALB2Q86YC2 1186 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 MSANTD4Q8NCY6 345 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 DHX38Q92620 1227 aaKnown RBP13□□□□□ -0.33
TSPAN9-206ENST00000537971 DHTKD1Q96HY7 919 aaPredicted RBP13□□□□□ -0.33
TSPAN9-206ENST00000537971 MAK16Q9BXY0 300 aaKnown RBP13□□□□□ -0.33
TSPAN9-206ENST00000537971 METTL14Q9HCE5 456 aaKnown RBP13□□□□□ -0.33
TSPAN9-206ENST00000537971 DZANK1Q9NVP4 752 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 LINC01553A4QN01 128 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 SRGAP2O75044 1071 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 N4BP1O75113 896 aaKnown RBP13□□□□□ -0.33
TSPAN9-206ENST00000537971 MOCS3O95396 460 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 GNA14O95837 355 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 PBX2P40425 430 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 IFRD2Q12894 506 aaPredicted RBP13□□□□□ -0.33
TSPAN9-206ENST00000537971 SARM1Q6SZW1 724 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 TMCO2Q7Z6W1 182 aaPredicted RBP13□□□□□ -0.33
TSPAN9-206ENST00000537971 TXNDC16Q9P2K2 825 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 AGAP1Q9UPQ3 857 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 HES2Q9Y543 173 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 NPHP3-ACAD11A0A0J9YXS1 232 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 ANKRD65E5RJM6 399 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 MYBP10242 640 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 ARL2P36404 184 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 ACOT2P49753 483 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 EPHB3P54753 998 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 FMNL3Q8IVF7 1028 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 RPGRIP1Q96KN7 1286 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 THSD7BQ9C0I4 1608 aa13□□□□□ -0.33
TSPAN9-206ENST00000537971 VGLL3A8MV65 326 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 RPL9P32969 192 aaKnown RBP12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 PSMC2P35998 433 aaKnown RBP12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 TOB1P50616 345 aaPredicted RBP12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 SNRPFP62306 86 aaKnown RBP12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 C2orf54Q08AI8 447 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 MESDQ14696 234 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 MTF1Q14872 753 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 PSMD5Q16401 504 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 UBE2Q1Q7Z7E8 422 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 C17orf80Q9BSJ5 609 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 TTPALQ9BTX7 342 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 FAM204AQ9H8W3 233 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 CYP4F11Q9HBI6 524 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 FBXO2Q9UK22 296 aaPredicted RBP12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 TSPAN1O60635 241 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 MTHFRP42898 656 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 FAM109BQ6ICB4 259 aaPredicted RBP12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 ITIH5Q86UX2 942 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 SYCE1Q8N0S2 351 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 COLGALT1Q8NBJ5 622 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 MYH6P13533 1939 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 PLXNB2O15031 1838 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 KRT15P19012 456 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 PRCPP42785 496 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 MAN2A1Q16706 1144 aa12.99□□□□□ -0.33
TSPAN9-206ENST00000537971 TCP11X2Q5H9J9 407 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms