RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 PSMD7P51665 324 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 NAPAP54920 295 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 JAM2P57087 298 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 CDC16Q13042 620 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 GPATCH4Q5T3I0 446 aaKnown RBP12□□□□□ -0.49
SEMA4D-221ENST00000537934 RHBDF2Q6PJF5 856 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 DLK2Q6UY11 383 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 PHLDB2Q86SQ0 1253 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 ARHGAP24Q8N264 748 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 DDX12PQ92771 950 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 COA7Q96BR5 231 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 DNAJC1Q96KC8 554 aaKnown RBP12□□□□□ -0.49
SEMA4D-221ENST00000537934 PNMA5Q96PV4 448 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 TSPAN18Q96SJ8 248 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 ZDHHC7Q9NXF8 308 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 BTBD7Q9P203 1132 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 ITGB1BP2Q9UKP3 347 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 NUMBLQ9Y6R0 609 aa12□□□□□ -0.49
SEMA4D-221ENST00000537934 POLR2AP24928 1970 aaKnown RBP11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 MIF4GDA9UHW6 222 aaKnown RBP11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 TP73O15350 636 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 STRNO43815 780 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 HAUS5O94927 633 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 CDK4P11802 303 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 PON1P27169 355 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 SMARCA1P28370 1054 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 RAP1GDS1P52306 607 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 EMP3P54852 163 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 TMEM266Q2M3C6 531 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 FYB2Q5VWT5 728 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 ZC3H3Q8IXZ2 948 aaKnown RBP11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 SNRNP27Q8WVK2 155 aaKnown RBP11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 GFM2Q969S9 779 aaKnown RBP11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 AGAP3Q96P47 875 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 EURLQ9NYK6 297 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 PTPN22Q9Y2R2 807 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 BIRC5O15392 142 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 THAP12O43422 761 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 CCNT1O60563 726 aaKnown RBP11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 OR6B1O95007 311 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 GAS8O95995 478 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 HARSP12081 509 aaKnown RBP11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 ITIH2P19823 946 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 FUT4P22083 530 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 AMPD1P23109 780 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 CHKAP35790 457 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 MLH1P40692 756 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 SNAP25P60880 206 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 DCTN2Q13561 401 aaKnown RBP11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 MFSD4BQ5TF39 518 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 RINLQ6ZS11 566 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 OTOAQ7RTW8 1153 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 ALDH16A1Q8IZ83 802 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 UBL4BQ8N7F7 174 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 GMCL1P1Q8NEA9 526 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 LNX1Q8TBB1 728 aaPredicted RBP11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 MAML1Q92585 1016 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 RAD54LQ92698 747 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 CCDC77Q9BR77 488 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 EBF3Q9H4W6 596 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 INIPQ9NRY2 104 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 NDE1Q9NXR1 346 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 TAS2R1Q9NYW7 299 aa11.99□□□□□ -0.49
SEMA4D-221ENST00000537934 CFAP69A5D8W1 941 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 VILLO15195 856 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 COASYQ13057 564 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 NR1H3Q13133 447 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 STAT4Q14765 748 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 ARL10Q8N8L6 244 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 PIP4K2CQ8TBX8 421 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 DCAF4Q8WV16 495 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 GAB3Q8WWW8 586 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 CDK5RAP3Q96JB5 506 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 UNC45AQ9H3U1 944 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 MTUS1Q9ULD2 1270 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 IGSF9BQ9UPX0 1349 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 ZNF862O60290 1169 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 GALK1P51570 392 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 AP2B1P63010 937 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 MED21Q13503 144 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 KRT72Q14CN4 511 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 SH3D19Q5HYK7 790 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 SPIRE2Q8WWL2 714 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 SIKE1Q9BRV8 207 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 NINJ2Q9NZG7 142 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 GRID1Q9ULK0 1009 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 ZNF148Q9UQR1 794 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 TMX2Q9Y320 296 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 ALG6Q9Y672 507 aa11.98□□□□□ -0.49
SEMA4D-221ENST00000537934 ZMYM2Q9UBW7 1377 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 SMCO2A6NFE2 343 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 TPD52L2O43399 206 aaKnown RBP11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 MAGEC1O60732 1142 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 DNAJC6O75061 913 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 GTF2H1P32780 548 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 PGM1P36871 562 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 GSTM4Q03013 218 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 IKQ13123 557 aaPredicted RBP11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 GPR162Q16538 588 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms