RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 SLC47A2Q86VL8 602 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 NPAS4Q8IUM7 802 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 REXO1L1PQ8IX06 675 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 TMEM199Q8N511 208 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 SLC30A5Q8TAD4 765 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 OLIG1Q8TAK6 271 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 LNX1Q8TBB1 728 aaPredicted RBP13.2□□□□□ -0.3
DDB1-209ENST00000537877 AGPAT1Q99943 283 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 SDCBP2Q9H190 292 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 PRDM5Q9NQX1 630 aaPredicted RBP13.2□□□□□ -0.3
DDB1-209ENST00000537877 TRMT1Q9NXH9 659 aaKnown RBP13.2□□□□□ -0.3
DDB1-209ENST00000537877 LRFN2Q9ULH4 789 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 NENFQ9UMX5 172 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 INPP5FQ9Y2H2 1132 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 SNX9Q9Y5X1 595 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 TET1Q8NFU7 2136 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 ALPK3Q96L96 1907 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.19□□□□□ -0.3
DDB1-209ENST00000537877 TRIM43BA6NCK2 446 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 DDX3XO00571 662 aaKnown RBP eCLIP13.19□□□□□ -0.3
DDB1-209ENST00000537877 PODXLO00592 558 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 EFCAB14O75071 495 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 CILPO75339 1184 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 POMCP01189 267 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 PAEPP09466 180 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 FAM163BP0C2L3 166 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 GNA15P30679 374 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 RAP1GAPP47736 663 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 TCTN1Q2MV58 587 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 MFSD5Q6N075 450 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 ALKBH5Q6P6C2 394 aaKnown RBP13.19□□□□□ -0.3
DDB1-209ENST00000537877 DPH6Q7L8W6 267 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 KIAA1328Q86T90 577 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 GLYCTKQ8IVS8 523 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 RPUSD2Q8IZ73 545 aaKnown RBP13.19□□□□□ -0.3
DDB1-209ENST00000537877 ABI1Q8IZP0 508 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 SLC20A1Q8WUM9 679 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 DDX1Q92499 740 aaKnown RBP13.19□□□□□ -0.3
DDB1-209ENST00000537877 TRIM43Q96BQ3 446 aaPredicted RBP13.19□□□□□ -0.3
DDB1-209ENST00000537877 MMS19Q96T76 1030 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 TSGA10Q9BZW7 698 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 NAGPAQ9UK23 515 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 BARX2Q9UMQ3 279 aaPredicted RBP13.19□□□□□ -0.3
DDB1-209ENST00000537877 PCDHA13Q9Y5I0 950 aa13.19□□□□□ -0.3
DDB1-209ENST00000537877 TTC3P53804 2025 aa13.18□□□□□ -0.3
DDB1-209ENST00000537877 ABHD14A-ACY1A0A1B0GW23 586 aa13.18□□□□□ -0.3
DDB1-209ENST00000537877 TACC1O75410 805 aa13.18□□□□□ -0.3
DDB1-209ENST00000537877 FGFR1P11362 822 aa13.18□□□□□ -0.3
DDB1-209ENST00000537877 MAGEA1P43355 309 aa13.18□□□□□ -0.3
DDB1-209ENST00000537877 AARSP49588 968 aaKnown RBP eCLIP13.18□□□□□ -0.3
DDB1-209ENST00000537877 LILRA4P59901 499 aa13.18□□□□□ -0.3
DDB1-209ENST00000537877 FMO1Q01740 532 aa13.18□□□□□ -0.3
DDB1-209ENST00000537877 CYP27A1Q02318 531 aa13.18□□□□□ -0.3
DDB1-209ENST00000537877 DSC1Q08554 894 aa13.18□□□□□ -0.3
DDB1-209ENST00000537877 UPP1Q16831 310 aa13.18□□□□□ -0.3
DDB1-209ENST00000537877 ARHGAP29Q52LW3 1261 aa13.18□□□□□ -0.3
DDB1-209ENST00000537877 TRIM72Q6ZMU5 477 aa13.18□□□□□ -0.3
DDB1-209ENST00000537877 LIMS2Q7Z4I7 341 aa13.18□□□□□ -0.3
DDB1-209ENST00000537877 UNC93AQ86WB7 457 aa13.18□□□□□ -0.3
DDB1-209ENST00000537877 CRIPAKQ8N1N5 446 aa13.18□□□□□ -0.3
DDB1-209ENST00000537877 TOP6BLQ8N6T0 577 aa13.18□□□□□ -0.3
DDB1-209ENST00000537877 MRPL9Q9BYD2 267 aaKnown RBP13.18□□□□□ -0.3
DDB1-209ENST00000537877 DNAI2Q9GZS0 605 aa13.18□□□□□ -0.3
DDB1-209ENST00000537877 SEPT11Q9NVA2 429 aaKnown RBP13.18□□□□□ -0.3
DDB1-209ENST00000537877 INTUQ9ULD6 942 aa13.18□□□□□ -0.3
DDB1-209ENST00000537877 ARHGEF37A1IGU5 675 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 CASTOR2A6NHX0 329 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 KIF2AO00139 706 aaPredicted RBP13.17□□□□□ -0.3
DDB1-209ENST00000537877 SPTLC1O15269 473 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 PJA2O43164 708 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 THAP12O43422 761 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 KRT86O43790 486 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 HUS1O60921 280 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 MMEP08473 750 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 GZMAP12544 262 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 CHRNB2P17787 502 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 CLCNKBP51801 687 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 RAD23BP54727 409 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 CDH8P55286 799 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 KIF5AQ12840 1032 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 CCDC122Q5T0U0 273 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 TAF3Q5VWG9 929 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 PPP1R2P3Q6NXS1 205 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 APPL2Q8NEU8 664 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 SPATA18Q8TC71 538 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 VWCEQ96DN2 955 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 NT5C1AQ9BXI3 368 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 ACP6Q9NPH0 428 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 TBC1D13Q9NVG8 400 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 PRKAG2Q9UGJ0 569 aa13.17□□□□□ -0.3
DDB1-209ENST00000537877 TMEM189-UBE2V1I3L0A0 370 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 MED7O43513 233 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 BAIAP3O94812 1187 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 TUBB4AP04350 444 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 CSF2RAP15509 400 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 WARSP23381 471 aaKnown RBP13.16□□□□□ -0.3
DDB1-209ENST00000537877 ITGB8P26012 769 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 ARHGAP25P42331 645 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 NDST1P52848 882 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 RNASELQ05823 741 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms