RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 IFIT3O14879 490 aaKnown RBP10.53□□□□□ -0.72
CPSF7-217ENST00000537162 B4GALT5O43286 388 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 CHMP2AO43633 222 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 ERLIN2O94905 339 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 VNN2O95498 520 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 MX1P20591 662 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 GJA4P35212 333 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 DPP6P42658 865 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 ZNF33AQ06730 810 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 LAMTOR4Q0VGL1 99 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 NFATC3Q12968 1075 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 GRIK2Q13002 908 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 PTPAQ15257 358 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 CRY1Q16526 586 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 AMHR2Q16671 573 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 PLEKHG6Q3KR16 790 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 GPR158Q5T848 1215 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 NOTUMQ6P988 496 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 HEATR3Q7Z4Q2 680 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 LEMD2Q8NC56 503 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 CRYGNQ8WXF5 182 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 BAP1Q92560 729 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 PI4K2AQ9BTU6 479 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 CNNM2Q9H8M5 875 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 BMP2KQ9NSY1 1161 aaPredicted RBP10.53□□□□□ -0.72
CPSF7-217ENST00000537162 AK5Q9Y6K8 562 aa10.53□□□□□ -0.72
CPSF7-217ENST00000537162 LRBAP50851 2863 aa10.52□□□□□ -0.72
CPSF7-217ENST00000537162 ITPR2Q14571 2701 aa10.52□□□□□ -0.72
CPSF7-217ENST00000537162 K7EQS6 105 aa10.52□□□□□ -0.73
CPSF7-217ENST00000537162 ARF4P18085 180 aaPredicted RBP10.52□□□□□ -0.73
CPSF7-217ENST00000537162 CYP4F8P98187 520 aa10.52□□□□□ -0.73
CPSF7-217ENST00000537162 RPL6Q02878 288 aaKnown RBP10.52□□□□□ -0.73
CPSF7-217ENST00000537162 SPDYCQ5MJ68 293 aa10.52□□□□□ -0.73
CPSF7-217ENST00000537162 RNF19BQ6ZMZ0 732 aa10.52□□□□□ -0.73
CPSF7-217ENST00000537162 ANO5Q75V66 913 aa10.52□□□□□ -0.73
CPSF7-217ENST00000537162 SFTPA1Q8IWL2 248 aa10.52□□□□□ -0.73
CPSF7-217ENST00000537162 CCDC82Q8N4S0 544 aa10.52□□□□□ -0.73
CPSF7-217ENST00000537162 SPACA7Q96KW9 195 aa10.52□□□□□ -0.73
CPSF7-217ENST00000537162 TRIM6Q9C030 488 aaPredicted RBP10.52□□□□□ -0.73
CPSF7-217ENST00000537162 CRISPLD1Q9H336 500 aa10.52□□□□□ -0.73
CPSF7-217ENST00000537162 UNC45AQ9H3U1 944 aa10.52□□□□□ -0.73
CPSF7-217ENST00000537162 RIC8AQ9NPQ8 531 aa10.52□□□□□ -0.73
CPSF7-217ENST00000537162 FBXL5Q9UKA1 691 aa10.52□□□□□ -0.73
CPSF7-217ENST00000537162 MMP17Q9ULZ9 603 aa10.52□□□□□ -0.73
CPSF7-217ENST00000537162 CCL26Q9Y258 94 aa10.52□□□□□ -0.73
CPSF7-217ENST00000537162 LRRK2Q5S007 2527 aa10.52□□□□□ -0.73
CPSF7-217ENST00000537162 DDX11L8A8MPP1 907 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 B3GAT3O94766 335 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 CLK2P49760 499 aaKnown RBP10.51□□□□□ -0.73
CPSF7-217ENST00000537162 CLCNKBP51801 687 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 NPEPPSP55786 919 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 SERINC3Q13530 473 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 PTPRNQ16849 979 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 XKR3Q5GH77 459 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 C6orf132Q5T0Z8 1188 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 WWC2Q6AWC2 1192 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 RNF149Q8NC42 400 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 RHBDD1Q8TEB9 315 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 CD101Q93033 1021 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 LENG9Q96B70 501 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 CCDC51Q96ER9 411 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 NAF1Q96HR8 494 aaKnown RBP10.51□□□□□ -0.73
CPSF7-217ENST00000537162 PSMG3-AS1Q96PY0 264 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 LPIN3Q9BQK8 851 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 ATXN3LQ9H3M9 355 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 GOLGA2P5Q9HBQ8 144 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 THG1LQ9NWX6 298 aaKnown RBP10.51□□□□□ -0.73
CPSF7-217ENST00000537162 DDX19BQ9UMR2 479 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 FNDC3AQ9Y2H6 1198 aaKnown RBP10.51□□□□□ -0.73
CPSF7-217ENST00000537162 YIPF1Q9Y548 306 aa10.51□□□□□ -0.73
CPSF7-217ENST00000537162 TMEM189-UBE2V1I3L0A0 370 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 AP5Z1O43299 807 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 FOSP01100 380 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-217ENST00000537162 THP07101 528 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 CHRM1P11229 460 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-217ENST00000537162 RXRAP19793 462 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 MAOBP27338 520 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 SMARCA1P28370 1054 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 AXLP30530 894 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 IMMTQ16891 758 aaKnown RBP10.5□□□□□ -0.73
CPSF7-217ENST00000537162 PREPLQ4J6C6 727 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-217ENST00000537162 PRR16Q569H4 304 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 CATIPQ7Z7H3 387 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 ERICH1Q86X53 443 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 WHAMMQ8TF30 809 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 HMGB4Q8WW32 186 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 FGF11Q92914 225 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 TMEM176AQ96HP8 235 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 TBC1D32Q96NH3 1257 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 SLC46A2Q9BY10 475 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 FAM117AQ9C073 453 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 ZDHHC4Q9NPG8 344 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 TPCN1Q9ULQ1 816 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.5□□□□□ -0.73
CPSF7-217ENST00000537162 MAN2B2Q9Y2E5 1009 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 HEMK1Q9Y5R4 338 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-217ENST00000537162 TAF6LQ9Y6J9 622 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 TRIP11Q15643 1979 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 NID2Q14112 1375 aa10.5□□□□□ -0.73
CPSF7-217ENST00000537162 A0A1W2PQD8 194 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms