RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 DAGLBQ8NCG7 672 aa5.74□□□□□ -1.49
CHD4-205ENST00000536301 FAM200AQ8TCP9 573 aa5.74□□□□□ -1.49
CHD4-205ENST00000536301 FAM20AQ96MK3 541 aa5.74□□□□□ -1.49
CHD4-205ENST00000536301 TMEM209Q96SK2 561 aa5.74□□□□□ -1.49
CHD4-205ENST00000536301 LPIN3Q9BQK8 851 aa5.74□□□□□ -1.49
CHD4-205ENST00000536301 GKN1Q9NS71 199 aa5.74□□□□□ -1.49
CHD4-205ENST00000536301 PRMT7Q9NVM4 692 aaPredicted RBP5.74□□□□□ -1.49
CHD4-205ENST00000536301 AFF4Q9UHB7 1163 aaKnown RBP5.74□□□□□ -1.49
CHD4-205ENST00000536301 SLC8A2Q9UPR5 921 aa5.74□□□□□ -1.49
CHD4-205ENST00000536301 CCL26Q9Y258 94 aa5.74□□□□□ -1.49
CHD4-205ENST00000536301 SLC27A5Q9Y2P5 690 aa5.74□□□□□ -1.49
CHD4-205ENST00000536301 PCDH15Q96QU1 1955 aa5.74□□□□□ -1.49
CHD4-205ENST00000536301 TSC2P49815 1807 aa5.74□□□□□ -1.49
CHD4-205ENST00000536301 ATXN2Q99700 1313 aaKnown RBP5.74□□□□□ -1.49
CHD4-205ENST00000536301 CCDC196A0A1B0GTZ2 297 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 ACKR2O00590 384 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 SYN3O14994 580 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 KHNYNO15037 678 aaKnown RBP5.73□□□□□ -1.49
CHD4-205ENST00000536301 CCNT1O60563 726 aaKnown RBP5.73□□□□□ -1.49
CHD4-205ENST00000536301 DGAT1O75907 488 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 LYPLA2O95372 231 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 CPB1P15086 417 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 GABRR2P28476 465 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 PDIA3P30101 505 aaKnown RBP5.73□□□□□ -1.49
CHD4-205ENST00000536301 GALK1P51570 392 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 SIM1P81133 766 aaPredicted RBP5.73□□□□□ -1.49
CHD4-205ENST00000536301 DUSP4Q13115 394 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 PRPF4BQ13523 1007 aaKnown RBP5.73□□□□□ -1.49
CHD4-205ENST00000536301 DMC1Q14565 340 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 ELF2Q15723 593 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 TMEM132AQ24JP5 1023 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 ITPRIPL2Q3MIP1 535 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 TSGA10IPQ3SY00 556 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 ARHGAP29Q52LW3 1261 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 XKR4Q5GH76 650 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 TPGS2Q68CL5 300 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 ALKAL1Q6UXT8 129 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 ARMCX6Q7L4S7 300 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 CYP2U1Q7Z449 544 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 NEK8Q86SG6 692 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 PIP4P1Q86T03 277 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 EXOC8Q8IYI6 725 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 ELMOD1Q8N336 334 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 SYNPOQ8N3V7 929 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 ATAD1Q8NBU5 361 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 STKLD1Q8NE28 680 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 BEST2Q8NFU1 509 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 OR2I1PQ8NGU4 316 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 RPLP0P6Q8NHW5 317 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 MDM1Q8TC05 714 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 BPIFB1Q8TDL5 484 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 HNRNPLLQ8WVV9 542 aaKnown RBP5.73□□□□□ -1.49
CHD4-205ENST00000536301 PIGKQ92643 395 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 DDX12PQ92771 950 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 KIF12Q96FN5 646 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 SUSD3Q96L08 255 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 PRIMPOLQ96LW4 560 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 JAKMIP1Q96N16 626 aaKnown RBP5.73□□□□□ -1.49
CHD4-205ENST00000536301 TBC1D32Q96NH3 1257 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 HSD17B14Q9BPX1 270 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 AGXT2Q9BYV1 514 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 CDT1Q9H211 546 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 ATXN3LQ9H3M9 355 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 EBF3Q9H4W6 596 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 IL21Q9HBE4 155 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 SH3GLB2Q9NR46 395 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 ANKEF1Q9NU02 776 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 TMEM74BQ9NUR3 256 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 TUBGCP4Q9UGJ1 667 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 MBD1Q9UIS9 605 aaPredicted RBP5.73□□□□□ -1.49
CHD4-205ENST00000536301 ANAPC1Q9H1A4 1944 aa5.73□□□□□ -1.49
CHD4-205ENST00000536301 PLXND1Q9Y4D7 1925 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 ZNF462Q96JM2 2506 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 CCDC194A0A1B0GVG4 234 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 MTMR11A4FU01 709 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 H7C4K7 107 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 DPYSL4O14531 572 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 ABLIM1O14639 778 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 TRDMT1O14717 391 aaKnown RBP5.72□□□□□ -1.49
CHD4-205ENST00000536301 PPEF2O14830 753 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 TRAPPC3O43617 180 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 MED24O75448 989 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 C1QL1O75973 258 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 RHOBTB1O94844 696 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 APBB3O95704 486 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 SPATA31C1P0DKV0 1188 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 DHPSP49366 369 aaPredicted RBP5.72□□□□□ -1.49
CHD4-205ENST00000536301 MCM2P49736 904 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 GUCY2FP51841 1108 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 DGKEP52429 567 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 SPAG1Q07617 926 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 RUNX3Q13761 415 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 TOB2Q14106 344 aaPredicted RBP5.72□□□□□ -1.49
CHD4-205ENST00000536301 MAPK6Q16659 721 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 DCAF4L1Q3SXM0 396 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 SEZ6Q53EL9 994 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 ATF7IP2Q5U623 682 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 RNF20Q5VTR2 975 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 PPP4R3AQ6IN85 833 aa5.72□□□□□ -1.49
CHD4-205ENST00000536301 ZNF280DQ6N043 979 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms