RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.78□□□□□ -0.04
LIG1-203ENST00000536218 CGB2Q6NT52 195 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 ALKBH5Q6P6C2 394 aaKnown RBP14.78□□□□□ -0.04
LIG1-203ENST00000536218 ANO5Q75V66 913 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 NSUN6Q8TEA1 469 aaKnown RBP14.78□□□□□ -0.04
LIG1-203ENST00000536218 ELMO3Q96BJ8 720 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 NMD3Q96D46 503 aaKnown RBP14.78□□□□□ -0.04
LIG1-203ENST00000536218 CLMNQ96JQ2 1002 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 TBK1Q9UHD2 729 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 ATAD5Q96QE3 1844 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 RASSF2P50749 326 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 FSTL1Q12841 308 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 ZNF211Q13398 564 aaPredicted RBP14.78□□□□□ -0.04
LIG1-203ENST00000536218 DRAP1Q14919 205 aaPredicted RBP14.78□□□□□ -0.04
LIG1-203ENST00000536218 RNF43Q68DV7 783 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 LRRC74BQ6ZQY2 392 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 U2AF1L4Q8WU68 220 aaKnown RBP14.78□□□□□ -0.04
LIG1-203ENST00000536218 CCDC127Q96BQ5 260 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 CENPKQ9BS16 269 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 TEX13BQ9BXU2 312 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 ZDHHC18Q9NUE0 388 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 CTNNAL1Q9UBT7 734 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 USP20Q9Y2K6 914 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 PCDHA10Q9Y5I2 948 aa14.78□□□□□ -0.04
LIG1-203ENST00000536218 RGS20O76081 388 aa14.77□□□□□ -0.04
LIG1-203ENST00000536218 BRAFP15056 766 aa14.77□□□□□ -0.04
LIG1-203ENST00000536218 SERPINB3P29508 390 aa14.77□□□□□ -0.04
LIG1-203ENST00000536218 MYL7Q01449 175 aa14.77□□□□□ -0.04
LIG1-203ENST00000536218 KRT76Q01546 638 aa14.77□□□□□ -0.04
LIG1-203ENST00000536218 CNTN2Q02246 1040 aa14.77□□□□□ -0.04
LIG1-203ENST00000536218 BFSP1Q12934 665 aa14.77□□□□□ -0.04
LIG1-203ENST00000536218 MAP7Q14244 749 aa14.77□□□□□ -0.04
LIG1-203ENST00000536218 CATSPERGQ6ZRH7 1159 aa14.77□□□□□ -0.04
LIG1-203ENST00000536218 SMC1BQ8NDV3 1235 aa14.77□□□□□ -0.04
LIG1-203ENST00000536218 REPS2Q8NFH8 660 aa14.77□□□□□ -0.04
LIG1-203ENST00000536218 CKAP2Q8WWK9 683 aa14.77□□□□□ -0.04
LIG1-203ENST00000536218 DNAJC1Q96KC8 554 aaKnown RBP14.77□□□□□ -0.04
LIG1-203ENST00000536218 ACCSQ96QU6 501 aa14.77□□□□□ -0.04
LIG1-203ENST00000536218 DMAC2Q9NW81 257 aa14.77□□□□□ -0.04
LIG1-203ENST00000536218 EMSYQ7Z589 1322 aa14.77□□□□□ -0.04
LIG1-203ENST00000536218 ATP5HO75947 161 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 LYNP07948 512 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 MARK3P27448 753 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 CFAP157Q5JU67 520 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 SH2D4BQ5SQS7 431 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 DSTYKQ6XUX3 929 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 C4orf19Q8IY42 314 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 GATA6Q92908 595 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 STMN2Q93045 179 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 TUBGCP5Q96RT8 1024 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 MAP3K20Q9NYL2 800 aaKnown RBP14.77□□□□□ -0.05
LIG1-203ENST00000536218 MTRF1LQ9UGC7 380 aaKnown RBP14.77□□□□□ -0.05
LIG1-203ENST00000536218 LTBP3Q9NS15 1303 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 PCNTO95613 3336 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 SIGLEC16A6NMB1 481 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 C19orf81C9J6K1 198 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 ADM5C9JUS6 153 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 CES2O00748 559 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 ZNF862O60290 1169 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 LMNAP02545 664 aaKnown RBP14.77□□□□□ -0.05
LIG1-203ENST00000536218 NEK3P51956 506 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 JAK3P52333 1124 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 LSAMPQ13449 338 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 SUPT20HL1Q3ZLR7 823 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 LIN52Q52LA3 116 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 TREML2Q5T2D2 321 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 ANKRD35Q8N283 1001 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 INTS2Q9H0H0 1204 aaKnown RBP14.77□□□□□ -0.05
LIG1-203ENST00000536218 ACAD9Q9H845 621 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 NAGPAQ9UK23 515 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 CHKBQ9Y259 395 aa14.77□□□□□ -0.05
LIG1-203ENST00000536218 SPDYE16A6NNV3 312 aaPredicted RBP14.76□□□□□ -0.05
LIG1-203ENST00000536218 BHMG1C9JSJ3 638 aaPredicted RBP14.76□□□□□ -0.05
LIG1-203ENST00000536218 OPHN1O60890 802 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 STAT1P42224 750 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 MPP2Q14168 576 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 EEPD1Q7L9B9 569 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 GLYCTKQ8IVS8 523 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 RIBC1Q8N443 379 aaPredicted RBP14.76□□□□□ -0.05
LIG1-203ENST00000536218 NKIRAS1Q9NYS0 192 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 HSPBP1Q9NZL4 362 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 SEPT9Q9UHD8 586 aaPredicted RBP14.76□□□□□ -0.05
LIG1-203ENST00000536218 PAIP2BQ9ULR5 123 aaKnown RBP14.76□□□□□ -0.05
LIG1-203ENST00000536218 USP2O75604 605 aaPredicted RBP14.76□□□□□ -0.05
LIG1-203ENST00000536218 POLGP54098 1239 aaPredicted RBP14.76□□□□□ -0.05
LIG1-203ENST00000536218 GHRHRQ02643 423 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 VGLL4Q14135 290 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 DUPD1Q68J44 220 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 VSTM1Q6UX27 236 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 JAMLQ86YT9 394 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 TPCN2Q8NHX9 752 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 SEC14L1Q92503 715 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 AZIN2Q96A70 460 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 SLC7A6OSQ96CW6 309 aaPredicted RBP14.76□□□□□ -0.05
LIG1-203ENST00000536218 MPP4Q96JB8 637 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 FAM84AQ96KN4 292 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 MKNK1Q9BUB5 465 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 TMEM206Q9H813 350 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 HOXC10Q9NYD6 342 aa14.76□□□□□ -0.05
LIG1-203ENST00000536218 COMMD3-BMI1R4GMX3 469 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms