RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 PLCB4Q15147 1175 aa13.95□□□□□ -0.18
LDLR-203ENST00000535915 CNGA2Q16280 664 aa13.95□□□□□ -0.18
LDLR-203ENST00000535915 KAZNQ674X7 775 aa13.95□□□□□ -0.18
LDLR-203ENST00000535915 ANKS4BQ8N8V4 417 aa13.95□□□□□ -0.18
LDLR-203ENST00000535915 DYDC1Q8WWB3 177 aa13.95□□□□□ -0.18
LDLR-203ENST00000535915 PRPF31Q8WWY3 499 aaKnown RBP13.95□□□□□ -0.18
LDLR-203ENST00000535915 JPH2Q9BR39 696 aaPredicted RBP13.95□□□□□ -0.18
LDLR-203ENST00000535915 CTNNAL1Q9UBT7 734 aa13.95□□□□□ -0.18
LDLR-203ENST00000535915 RGS17Q9UGC6 210 aaPredicted RBP13.95□□□□□ -0.18
LDLR-203ENST00000535915 PI4K2BG5E9Z4 385 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 ATP5DP30049 168 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 MNAT1P51948 309 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 TARBP2Q15633 366 aaKnown RBP13.94□□□□□ -0.18
LDLR-203ENST00000535915 SPRED3Q2MJR0 410 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 ZNF394Q53GI3 561 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 ANKRD20A8PQ5CZ79 823 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 IZUMO3Q5VZ72 239 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 FAM160B1Q5W0V3 765 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 ANKS1BQ7Z6G8 1248 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 NEU2Q9Y3R4 380 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 DNM1LO00429 736 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 ASAP2O43150 1006 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 MMP8P22894 467 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 BRD2P25440 801 aaKnown RBP13.94□□□□□ -0.18
LDLR-203ENST00000535915 TCF7P36402 384 aaPredicted RBP13.94□□□□□ -0.18
LDLR-203ENST00000535915 ATP13A4Q4VNC1 1196 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 BRSK2Q8IWQ3 736 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 BBOF1Q8ND07 529 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 MGARPQ8TDB4 240 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 MTMR12Q9C0I1 747 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 MTFR1LQ9H019 292 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 CCDC134Q9H6E4 229 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 NINJ2Q9NZG7 142 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 SAMD15Q9P1V8 674 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 MAFO75444 373 aaPredicted RBP13.94□□□□□ -0.18
LDLR-203ENST00000535915 ASS1P00966 412 aaKnown RBP13.94□□□□□ -0.18
LDLR-203ENST00000535915 KRT10P13645 584 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 ATF7P17544 494 aaPredicted RBP13.94□□□□□ -0.18
LDLR-203ENST00000535915 NFX1Q12986 1120 aaKnown RBP13.94□□□□□ -0.18
LDLR-203ENST00000535915 LRRC14Q15048 493 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 TREML2Q5T2D2 321 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 KCNV1Q6PIU1 500 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 ZPBP2Q6X784 338 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 EEPD1Q7L9B9 569 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 PRUNE1Q86TP1 453 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 WDR49Q8IV35 697 aa13.94□□□□□ -0.18
LDLR-203ENST00000535915 MRPL4Q9BYD3 311 aaKnown RBP13.94□□□□□ -0.18
LDLR-203ENST00000535915 SSC5DA1L4H1 1573 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 TMEM120BA0PK00 339 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 SRGAP2CP0DJJ0 459 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 TCF4P15884 667 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 CREB1P16220 341 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 ZNF132P52740 706 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 AP3M2P53677 418 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 MYL6P60660 151 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 TAX1BP1Q86VP1 789 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 CCT6BQ92526 530 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 MCEEQ96PE7 176 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 ELAC2Q9BQ52 826 aaKnown RBP13.93□□□□□ -0.18
LDLR-203ENST00000535915 KCNK9Q9NPC2 374 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 TMEM191CA6NGB0 347 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 MSCO60682 206 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 TOM1L1O75674 476 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 CALB1P05937 261 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 TMEM191BP0C7N4 346 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 EFNA5P52803 228 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 GSCP56915 257 aaPredicted RBP13.93□□□□□ -0.18
LDLR-203ENST00000535915 NEDD9Q14511 834 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 P3H1Q32P28 736 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 NOL9Q5SY16 702 aaKnown RBP13.93□□□□□ -0.18
LDLR-203ENST00000535915 DCUN1D2Q6PH85 259 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 PIGWQ7Z7B1 504 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 NCAPG2Q86XI2 1143 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 RCOR2Q8IZ40 523 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 P3H4Q92791 437 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 RBM41Q96IZ5 413 aaKnown RBP13.93□□□□□ -0.18
LDLR-203ENST00000535915 NSRP1Q9H0G5 558 aaKnown RBP13.93□□□□□ -0.18
LDLR-203ENST00000535915 BTBD7Q9P203 1132 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 TBK1Q9UHD2 729 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 ANK1P16157 1881 aa13.93□□□□□ -0.18
LDLR-203ENST00000535915 FOXO6A8MYZ6 492 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 KRT1P04264 644 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 MARK3P27448 753 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 LMNB2Q03252 620 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 SH3D19Q5HYK7 790 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 DNAJC24Q6P3W2 148 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 LBX2Q6XYB7 198 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 UBR7Q8N806 425 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 C9orf72Q96LT7 481 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 SLITRK1Q96PX8 696 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 KDM4CQ9H3R0 1056 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 CISHQ9NSE2 258 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 DONSONQ9NYP3 566 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 EVPLQ92817 2033 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 SOWAHBA6NEL2 793 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 CCT8L1PA6NM43 557 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 F8VP50 259 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 FAM189A1O60320 539 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 KLRC2P26717 231 aa13.92□□□□□ -0.18
LDLR-203ENST00000535915 SCTRP47872 440 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms