RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 DSC1Q08554 894 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 PPIGQ13427 754 aaKnown RBP eCLIP6.96□□□□□ -1.3
CDCA3-205ENST00000535871 TUSC3Q13454 348 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 CUL2Q13617 745 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 IKBKEQ14164 716 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 DRAP1Q14919 205 aaPredicted RBP6.96□□□□□ -1.3
CDCA3-205ENST00000535871 NAB2Q15742 525 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 SLC18A3Q16572 532 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 ASTE1Q2TB18 679 aaPredicted RBP6.96□□□□□ -1.3
CDCA3-205ENST00000535871 SV2CQ496J9 727 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 ZNF667Q5HYK9 610 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 HGSNATQ68CP4 663 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 IQCEQ6IPM2 695 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 TRIM72Q6ZMU5 477 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 AGMOQ6ZNB7 445 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 RETREG3Q86VR2 466 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 TMEM192Q8IY95 271 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 PPM1KQ8N3J5 372 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 TOP6BLQ8N6T0 577 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 UBR7Q8N806 425 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 GSTCDQ8NEC7 633 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 DBF4BQ8NFT6 615 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 KIAA1524Q8TCG1 905 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 URGCPQ8TCY9 931 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 SEMA4DQ92854 862 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 HPDLQ96IR7 371 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 CCDC42Q96M95 316 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 ZMAT2Q96NC0 199 aaKnown RBP6.96□□□□□ -1.3
CDCA3-205ENST00000535871 PPP1R16BQ96T49 567 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 POP1Q99575 1024 aaKnown RBP6.96□□□□□ -1.3
CDCA3-205ENST00000535871 SYT11Q9BT88 431 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 ZNF518BQ9C0D4 1074 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 GPR88Q9GZN0 384 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 WNT8AQ9H1J5 351 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 UBE2TQ9NPD8 197 aaPredicted RBP6.96□□□□□ -1.3
CDCA3-205ENST00000535871 PARP2Q9UGN5 583 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 DSEQ9UL01 958 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 FHOD1Q9Y613 1164 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 TRIP11Q15643 1979 aa6.96□□□□□ -1.3
CDCA3-205ENST00000535871 LTBP2Q14767 1821 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 BTNL10A8MVZ5 291 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 PTGESO14684 152 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 TRAPPC3O43617 180 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 ZNF500O60304 480 aaPredicted RBP6.95□□□□□ -1.3
CDCA3-205ENST00000535871 MGEA5O60502 916 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 OFD1O75665 1012 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 NDUFA10O95299 355 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 LSM8O95777 96 aaKnown RBP6.95□□□□□ -1.3
CDCA3-205ENST00000535871 CST3P01034 146 aaPredicted RBP6.95□□□□□ -1.3
CDCA3-205ENST00000535871 ITGB3P05106 788 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 CCDC175P0C221 793 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 ACO1P21399 889 aaKnown RBP6.95□□□□□ -1.3
CDCA3-205ENST00000535871 TAF6P49848 677 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 ZNF132P52740 706 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 ADKP55263 362 aaKnown RBP6.95□□□□□ -1.3
CDCA3-205ENST00000535871 WNT7BP56706 349 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 MYL6P60660 151 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 PTK2Q05397 1052 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 KLHL30Q0D2K2 578 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 ELAVL2Q12926 359 aaKnown RBP6.95□□□□□ -1.3
CDCA3-205ENST00000535871 TCEAL1Q15170 157 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 ASIC2Q16515 512 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 LRRC26Q2I0M4 334 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 NOMO2Q5JPE7 1267 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 C9orf57Q5W0N0 161 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 DCLRE1AQ6PJP8 1040 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 RTN4RL1Q86UN2 441 aaPredicted RBP6.95□□□□□ -1.3
CDCA3-205ENST00000535871 CDR2LQ86X02 465 aaPredicted RBP6.95□□□□□ -1.3
CDCA3-205ENST00000535871 PHOSPHO2Q8TCD6 241 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 DIS3LQ8TF46 1054 aaKnown RBP6.95□□□□□ -1.3
CDCA3-205ENST00000535871 VCPIP1Q96JH7 1222 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 KREMEN1Q96MU8 473 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 TMEM175Q9BSA9 504 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 TSGA10Q9BZW7 698 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 KCNF1Q9H3M0 494 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 SPTLC3Q9NUV7 552 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 ARHGAP20Q9P2F6 1191 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 MYO1AQ9UBC5 1043 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 PRKAG2Q9UGJ0 569 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 LCMT1Q9UIC8 334 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 BARX2Q9UMQ3 279 aaPredicted RBP6.95□□□□□ -1.3
CDCA3-205ENST00000535871 ATP11BQ9Y2G3 1177 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 PCDHB7Q9Y5E2 793 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 EPN1Q9Y6I3 576 aaPredicted RBP6.95□□□□□ -1.3
CDCA3-205ENST00000535871 COL4A6Q14031 1691 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 TET1Q8NFU7 2136 aa6.95□□□□□ -1.3
CDCA3-205ENST00000535871 MICAL3Q7RTP6 2002 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 A0A0A6YYK5 440 aaPredicted RBP6.94□□□□□ -1.3
CDCA3-205ENST00000535871 KPNA7A9QM74 516 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 RNF225M0QZC1 329 aaPredicted RBP6.94□□□□□ -1.3
CDCA3-205ENST00000535871 M0QZQ0 153 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 FOXN3O00409 490 aaPredicted RBP6.94□□□□□ -1.3
CDCA3-205ENST00000535871 GABRDO14764 452 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 MED7O43513 233 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 CILPO75339 1184 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 CYP11A1P05108 521 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 RAG1P15918 1043 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 TYMPP19971 482 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 AKAP5P24588 427 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 MSNP26038 577 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms