RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 HOXA3O43365 443 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-202ENST00000535689 ZRANB2O95218 330 aaKnown RBP eCLIP4.05□□□□□ -1.763e-9■■■■■ 27.5
SNHG1-202ENST00000535689 HRGP04196 525 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 GNAI2P04899 355 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 RAP2AP10114 183 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 PPP3CAQ08209 521 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 PICALMQ13492 652 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 ANO6Q4KMQ2 910 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 PABPC1LQ4VXU2 614 aaKnown RBP4.05□□□□□ -1.76
SNHG1-202ENST00000535689 ARMC6Q6NXE6 501 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 DRICH1Q6PGQ1 229 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-202ENST00000535689 EPM2AIP1Q7L775 607 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-202ENST00000535689 SGMS1Q86VZ5 419 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 TPH2Q8IWU9 490 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 D2HGDHQ8N465 521 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 TTC9BQ8N6N2 239 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 ST8SIA2Q92186 375 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 TMX3Q96JJ7 454 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 LRGUKQ96M69 825 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 ZNF512Q96ME7 567 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-202ENST00000535689 SAMD11Q96NU1 681 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 DCLRE1CQ96SD1 692 aaKnown RBP4.05□□□□□ -1.76
SNHG1-202ENST00000535689 PTPN18Q99952 460 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 CPPED1Q9BRF8 314 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-202ENST00000535689 PACSIN1Q9BY11 444 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 GTPBP4Q9BZE4 634 aaKnown RBP4.05□□□□□ -1.76
SNHG1-202ENST00000535689 C11orf54Q9H0W9 315 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-202ENST00000535689 TMEM60Q9H2L4 133 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 DEF6Q9H4E7 631 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 LMBRD1Q9NUN5 540 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 PNPOQ9NVS9 261 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 PLA2G3Q9NZ20 509 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 ZDHHC8Q9ULC8 765 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 ZFR2Q9UPR6 939 aaKnown RBP4.05□□□□□ -1.76
SNHG1-202ENST00000535689 NEU2Q9Y3R4 380 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 TOPAZ1Q8N9V7 1692 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 WDR90Q96KV7 1748 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 PEAK1Q9H792 1746 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 CRYBG1Q9Y4K1 1723 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 POLR3AO14802 1390 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-202ENST00000535689 PLEKHH1Q9ULM0 1364 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 ACEP12821 1306 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 PHRF1Q9P1Y6 1649 aaKnown RBP4.04□□□□□ -1.76
SNHG1-202ENST00000535689 TBKBP1A7MCY6 615 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 VSTM5A8MXK1 200 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 H3BUI4 141 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 TRIM13O60858 407 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 ZBED1O96006 694 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 CHEK2O96017 543 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 THP07101 528 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 COMTP21964 271 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 CASRP41180 1078 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 FXR1P51114 621 aaKnown RBP eCLIP4.04□□□□□ -1.76
SNHG1-202ENST00000535689 HK3P52790 923 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 HABP2Q14520 560 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-202ENST00000535689 BRD3Q15059 726 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 AMOTQ4VCS5 1084 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 DACT2Q5SW24 774 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 SPOCD1Q6ZMY3 1216 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 LCNL1Q6ZST4 164 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 SEM1Q6ZVN7 128 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 PDSS2Q86YH6 399 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 FAM43AQ8N2R8 423 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 NSUN6Q8TEA1 469 aaKnown RBP4.04□□□□□ -1.76
SNHG1-202ENST00000535689 TSR2Q969E8 191 aaKnown RBP4.04□□□□□ -1.76
SNHG1-202ENST00000535689 MOGAT1Q96PD6 335 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 OR14A2Q96R54 314 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 CDK19Q9BWU1 502 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 LRRC27Q9C0I9 530 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 NUP62CLQ9H1M0 184 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 PIH1D1Q9NWS0 290 aaKnown RBP4.04□□□□□ -1.76
SNHG1-202ENST00000535689 PCDHA13Q9Y5I0 950 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 TULP4Q9NRJ4 1543 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 USP6P35125 1406 aa4.04□□□□□ -1.76
SNHG1-202ENST00000535689 PCNTO95613 3336 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 A0A088AWK7 358 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 A0A1W2PPL8 197 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 GOLIM4O00461 696 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 PHGDHO43175 533 aaKnown RBP4.03□□□□□ -1.76
SNHG1-202ENST00000535689 TUSC2O75896 110 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 SOAT2O75908 522 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 HLA-DOAP06340 250 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 XRCC6P12956 609 aaKnown RBP eCLIP4.03□□□□□ -1.76
SNHG1-202ENST00000535689 GUCY1A2P33402 732 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 TBX4P57082 545 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 TGFB2P61812 414 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 CNGB1Q14028 1251 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-202ENST00000535689 NFIXQ14938 502 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 SAFBQ15424 915 aaKnown RBP eCLIP4.03□□□□□ -1.76
SNHG1-202ENST00000535689 ELAVL1Q15717 326 aaKnown RBP4.03□□□□□ -1.76
SNHG1-202ENST00000535689 ATXN7L2Q5T6C5 722 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-202ENST00000535689 FOXR2Q6PJQ5 311 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 CCDC149Q6ZUS6 474 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 CHST15Q7LFX5 561 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-202ENST00000535689 C14orf80Q86SX3 495 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 PLXDC1Q8IUK5 500 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 CCDC146Q8IYE0 955 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 TRMT2AQ8IZ69 625 aaKnown RBP4.03□□□□□ -1.76
SNHG1-202ENST00000535689 MSL3Q8N5Y2 521 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms