RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 OGTO15294 1046 aa12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 LIG1P18858 919 aa12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 MARCKSP29966 332 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 MCM4P33991 863 aa12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 OSTNP61366 133 aa12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 GTF2BQ00403 316 aa12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 TWF1Q12792 350 aa12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 GNL2Q13823 731 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 DGKKQ5KSL6 1271 aa12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 LAIR1Q6GTX8 287 aa12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 RNF19BQ6ZMZ0 732 aa12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 HAUS6Q7Z4H7 955 aa12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 RALGPS2Q86X27 583 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 DCLK2Q8N568 766 aa12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 ZSCAN18Q8TBC5 510 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 C2orf15Q8WU43 125 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 FAM3CQ92520 227 aa12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 RTKNQ9BST9 563 aa12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 ASB7Q9H672 318 aa12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 CPSF3Q9UKF6 684 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 TBX20Q9UMR3 447 aa12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 C2CD2Q9Y426 696 aa12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 YIPF1Q9Y548 306 aa12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 NCANO14594 1321 aa12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 ZNF263O14978 683 aa12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 BMP15O95972 392 aa12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 RETP07949 1114 aa12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 PLA2G4BP0C869 781 aa12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 CXCL8P10145 99 aa12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 PLCB2Q00722 1185 aa12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 CCINQ13939 588 aa12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 GAS6Q14393 721 aa12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 ENOX2Q16206 610 aaKnown RBP12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 GAREM2Q75VX8 874 aa12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 NT5DC4Q86YG4 428 aa12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 ST13P5Q8NFI4 369 aaPredicted RBP12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 CRISPLD1Q9H336 500 aa12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 TUBGCP4Q9UGJ1 667 aa12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 DSEQ9UL01 958 aa12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 PIAS3Q9Y6X2 628 aa12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 MORC2Q9Y6X9 1032 aaPredicted RBP12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 KIF26AQ9ULI4 1882 aaPredicted RBP12.19□□□□□ -0.46
CLSTN3-206ENST00000535668 MTMR11A4FU01 709 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 SFI1A8K8P3 1242 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 HEPACAM2A8MVW5 462 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 NEFLP07196 543 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 GDI1P31150 447 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 CXCL12P48061 93 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 TUFMP49411 452 aaKnown RBP12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 FOSBP53539 338 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 ATXN1P54253 815 aaKnown RBP12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 EPHB3P54753 998 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 PPP2R3AQ06190 1150 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 LRRC32Q14392 662 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 RSPO4Q2I0M5 234 aaPredicted RBP12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 ARHGAP29Q52LW3 1261 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 OVOS1Q6IE37 1185 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 DNAJB7Q7Z6W7 309 aaPredicted RBP12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 ITIH5Q86UX2 942 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 HS6ST3Q8IZP7 471 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 SPATA18Q8TC71 538 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 RSPRY1Q96DX4 576 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 STRA6Q9BX79 667 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 LMAN1LQ9HAT1 526 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 PARVGQ9HBI0 331 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 BLOC1S4Q9NUP1 217 aa12.18□□□□□ -0.46
CLSTN3-206ENST00000535668 NUP210Q8TEM1 1887 aaPredicted RBP12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 SPAG17Q6Q759 2223 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 LACTBL1A8MY62 500 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 K7ESF4 209 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 CPB1P15086 417 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 LONP1P36776 959 aaKnown RBP12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 VIPR2P41587 438 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 DUSP4Q13115 394 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 GRM2Q14416 872 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 RABEP1Q15276 862 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 TEAD2Q15562 447 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 WDR44Q5JSH3 913 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 C9orf57Q5W0N0 161 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 SLC39A4Q6P5W5 647 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 ARID3BQ8IVW6 561 aaPredicted RBP12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 HVCN1Q96D96 273 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 KIF12Q96FN5 646 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 LOXL4Q96JB6 756 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 LRRC3BQ96PB8 259 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 REEP2Q9BRK0 252 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 ZCWPW1Q9H0M4 648 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 TASP1Q9H6P5 420 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 IL21Q9HBE4 155 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 ANKFY1Q9P2R3 1169 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 NCDNQ9UBB6 729 aa12.17□□□□□ -0.46
CLSTN3-206ENST00000535668 TICRRQ7Z2Z1 1910 aa12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 SLC30A4O14863 429 aa12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 HNRNPDLO14979 420 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 PPP1R37O75864 691 aa12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 ODC1P11926 461 aa12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 CTHP32929 405 aa12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 TNFSF9P41273 254 aa12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 ALDH1A3P47895 512 aa12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 LIMK1P53667 647 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms