RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 APOL5Q9BWW9 433 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 RSAD1Q9HA92 442 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 PCMTD2Q9NV79 361 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 C17orf102A2RUQ5 167 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 MYO1GB0I1T2 1018 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 SNRPFP62306 86 aaKnown RBP19■□□□□ 0.63
SFSWAP-203ENST00000535236 HPCAP84074 193 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19■□□□□ 0.63
SFSWAP-203ENST00000535236 ANKRD13AQ8IZ07 590 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 GLT1D1Q96MS3 346 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 PRMT1Q99873 361 aaKnown RBP19■□□□□ 0.63
SFSWAP-203ENST00000535236 ADAM33Q9BZ11 813 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 SNX12Q9UMY4 172 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 KRT8P05787 483 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 NCAM1P13591 858 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 MAGEA9P43362 315 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 RAD23BP54727 409 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 EXOSC10Q01780 885 aaKnown RBP19■□□□□ 0.63
SFSWAP-203ENST00000535236 TSGA10IPQ3SY00 556 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 RABGAP1LQ5R372 815 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 STOX1Q6ZVD7 989 aa19■□□□□ 0.63
SFSWAP-203ENST00000535236 SRP72O76094 671 aaKnown RBP18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 FKBP9O95302 570 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 POLBP06746 335 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 WEE2P0C1S8 567 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 TAF6P49848 677 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 BYSLQ13895 437 aaKnown RBP18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 E2F4Q16254 413 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 ZC2HC1CQ53FD0 456 aaPredicted RBP18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 XRRA1Q6P2D8 792 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 FKBP9P1Q75LS8 142 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 NIF3L1Q9GZT8 377 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 PCDHB2Q9Y5E7 798 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 TCP11X1B4DZS4 312 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 FAM200BP0CF97 657 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 SRGNP10124 158 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 PDHBP11177 359 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 ALDH7A1P49419 539 aaKnown RBP18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 NBPF20Q3BBV1 942 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 GPAT2Q6NUI2 795 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 TRIM51Q9BSJ1 452 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 PKD2L2Q9NZM6 624 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 RHOBTB3O94955 611 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 RPS12P25398 132 aaKnown RBP18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 PRUNE1Q86TP1 453 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 FAM205CA6NFA0 338 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 MYMKA6NI61 221 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 H0Y626 953 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 EIF3DO15371 548 aaKnown RBP eCLIP18.99■□□□□ 0.632e-6■□□□□ 9.5
SFSWAP-203ENST00000535236 CLASP2O75122 1294 aaKnown RBP18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 TRIM16O95361 564 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 STAG3L1P0CL83 205 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 VPS72Q15906 364 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 HPDLQ96IR7 371 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 PRG3Q9Y2Y8 225 aaPredicted RBP18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 ADGRA2Q96PE1 1338 aa18.99■□□□□ 0.63
SFSWAP-203ENST00000535236 RSPH10B2B2RC85 870 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 RSPH10BP0C881 870 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 DPYDQ12882 1025 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 PTK6Q13882 451 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 LRRC8BQ6P9F7 803 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 LRRC1Q9BTT6 524 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 CINPQ9BW66 212 aaPredicted RBP18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 COLEC11Q9BWP8 271 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 H2AFY2Q9P0M6 372 aaPredicted RBP18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 SSU72P8A0A1W2PR75 194 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 ODC1P11926 461 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 CHRM3P20309 590 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 EDRF1Q3B7T1 1238 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 RABL6Q3YEC7 729 aaPredicted RBP18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 TMEM39BQ9GZU3 492 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 HEATR9A2RTY3 570 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 C2CD2LO14523 706 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 FAM107AO95990 144 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 CDH18Q13634 790 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 TRIM48Q8IWZ4 208 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 SPATA18Q8TC71 538 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 CRLS1Q9UJA2 301 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 CHMP2BQ9UQN3 213 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 USP27XA6NNY8 438 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 ENO3P13929 434 aaPredicted RBP18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 GTF2H1P32780 548 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 ZNF34Q8IZ26 560 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 ATP6V0D2Q8N8Y2 350 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 MS4A14Q96JA4 679 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 DEFB129Q9H1M3 183 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 RANBP17Q9H2T7 1088 aaKnown RBP18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 ZC4H2Q9NQZ6 224 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 CDYLQ9Y232 598 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 ABCC3O15438 1527 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 PITPNM2Q9BZ72 1349 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 SOAT1P35610 550 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 TMEM132BQ14DG7 1078 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 MAPRE1Q15691 268 aaKnown RBP18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 STYK1Q6J9G0 422 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 OLFM3Q96PB7 478 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 METTL5Q9NRN9 209 aaKnown RBP18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 ABI2Q9NYB9 513 aaPredicted RBP18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 FHOD1Q9Y613 1164 aa18.98■□□□□ 0.63
SFSWAP-203ENST00000535236 ARHGEF40Q8TER5 1519 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms